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enhancin-2

Euk-Vir

Spodoptera_frugiperda_granulovirus

enhancin-2__YP_009121917__Spodoptera_frugiperda_granulovirus__307454

Identity

Accession:: YP_009121917 ↗
Protein ID:: enhancin-2
Kingdom:: euk

Quality

70.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Spodoptera_frugiperda_granulovirus

TaxID: 307454

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 281-421

PDB

D2 high residues 432-530

PDB

Domain cluster: rep: enhancin-1__YP_009345852__Mythimna_unipuncta_granulovirus_B__2169746__D446-540

D3 high residues 537-671

PDB

D4 high residues 732-850

PDB

D5 medium residues 1-110

PDB

Domain cluster: rep: VEF__YP_008378473__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D1-112

D6 medium residues 111-173_200-228

PDB

Domain cluster: rep: enhancin-1__YP_003422496__Pseudalatia_unipuncta_granulovirus__36355__D115-165_182-221

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4fcaA02	3.40.390.80	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Peptidase M60, enhancin-like domain 2	0.81	71.0	6.25e-01	96.7%	85.9%
3qthB00	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.52	40.0	3.39e-01	83.7%	64.0%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1945553	2498.1.1.41 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60	0.81	74.0	5.11e-01	100.0%	43.3%
3860924	2498.1.1.41 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60	0.80	73.0	5.08e-01	100.0%	37.9%
3753639	2498.1.1.41 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60	0.78	68.0	5.14e-01	95.7%	48.4%
2704655	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.77	70.0	4.56e-01	98.9%	38.0%
1952651	2498.1.1.41 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60	0.77	69.0	4.52e-01	98.9%	37.9%
1952631	2498.1.1.41 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60	0.76	67.0	4.50e-01	96.7%	32.7%
4332917	2498.1.1.41 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60	0.74	66.0	4.59e-01	100.0%	36.3%
3290364	327.7.1.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like	0.56	49.0	4.29e-01	98.9%	95.7%

D7 medium residues 174-199_229-280

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2a9uA01	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.54	37.0	3.20e-01	71.8%	56.3%
3u1nB01	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.52	45.0	3.00e-01	97.4%	75.9%
5cwhA01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.50	36.0	2.94e-01	76.9%	66.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3609311	7575.1.1.0 ↗	a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like	0.73	49.0	3.68e-01	70.5%	84.3%

D8 medium residues 676-721

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1hr5A00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.72	53.0	5.31e-01	82.6%	100.0%
5djsA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.71	58.0	4.21e-01	97.8%	32.2%
1skvA00	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.69	51.0	4.68e-01	82.6%	60.9%
3zdmB00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.69	55.0	5.43e-01	91.3%	90.0%
2d9dA00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.67	56.0	4.64e-01	100.0%	75.3%
4asvA00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.67	54.0	4.57e-01	91.3%	54.4%
2no4A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.66	43.0	3.66e-01	71.7%	41.3%
3m0fB02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.66	55.0	4.15e-01	100.0%	65.9%
7ymiD01	1.20.85.10	Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like	0.66	48.0	3.31e-01	82.6%	28.3%
2yevA02	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.62	45.0	4.01e-01	82.6%	58.1%
2jaeA03	1.20.1440.240	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.59	46.0	3.76e-01	93.5%	44.6%
3dkqA02	4.10.860.20	Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain	0.56	38.0	3.81e-01	76.1%	95.7%
1gd8A00	3.90.1030.10	Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17	0.54	47.0	3.66e-01	100.0%	77.1%
1vquA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.54	43.0	3.88e-01	89.1%	65.7%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3238743	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.75	65.0	5.98e-01	100.0%	78.3%
3213319	632.2.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains	0.57	40.0	3.81e-01	82.6%	60.0%