env

Euk-Vir

White-tufted-ear_marmoset_simian_foamy_virus

env__YP_009508578__White-tufted-ear_marmoset_simian_foamy_virus__2170205

Identity

61.2 mean pLDDT

Pararnavirae› Artverviricota› Revtraviricetes› Ortervirales› Retroviridae› Simiispumavirus› White-tufted-ear_marmoset_simian_foamy_virus

TaxID: 2170205

View cluster (13 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-89

PDB

D2 medium residues 150-217_638-790

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03408.21 best	Foamy_virus_ENV	276.1	7.90e-82	70.1%	15.6%
PF03408.21	Foamy_virus_ENV	95.9	2.20e-27	31.2%	6.9%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1jj2L00	3.40.1120.10	Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15	0.55	27.0	2.88e-01	85.1%	50.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3270041	872.3.1.7 ↗	a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4	0.65	29.0	4.11e-01	86.0%	86.7%
2722705	5093.1.1.1 ↗	a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly	0.64	60.0	4.70e-01	100.0%	71.5%
3275694	872.3.1.6 ↗	a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3	0.64	27.0	3.92e-01	78.7%	84.0%
4874199	11.40.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly	0.64	59.0	4.67e-01	100.0%	72.2%

D3 medium residues 222-542

PDB

D4 medium residues 791-845_864-874

PDB

D5 medium residues 883-972

PDB