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envelope_fusion_protein
Euk-VirMythimna_unipuncta_granulovirus_B
envelope_fusion_protein__YP_009345747__Mythimna_unipuncta_granulovirus_B__2169746
Identity
- Accession:
- YP_009345747 ↗
- Protein ID:
- envelope_fusion_protein
- Kingdom:
- euk
Quality
70.0
mean pLDDT
Taxonomy
TaxID: 2169746
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-50_306-403_477-502
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 117.1 | 1.30e-33 | 72.3% | 15.9% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ztmA01 | 2.40.490.10 | Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain | 0.75 | 50.0 | 5.78e-01 | 79.7% | 92.6% |
| 1lwjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 19.0 | 2.95e-01 | 78.4% | 92.0% |
| 1of5B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 26.0 | 2.81e-01 | 79.1% | 53.1% |
| 3dxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 22.0 | 2.46e-01 | 79.1% | 46.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3407194 | 5093.1.1.2 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Baculo_F | 0.83 | 68.0 | 4.83e-01 | 85.1% | 99.0% |
| 4874199 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.64 | 57.0 | 4.07e-01 | 98.6% | 93.2% |
| 2868232 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.63 | 57.0 | 4.10e-01 | 98.6% | 96.3% |
| 2722705 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.62 | 56.0 | 3.97e-01 | 98.6% | 92.5% |
| 3599562 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.53 | 26.0 | 3.20e-01 | 82.4% | 74.1% |
D2
medium
residues 51-120_146-252
Domain cluster:
rep: F_protein__YP_009165735__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D49-139_173-272
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 109.0 | 3.50e-31 | 63.3% | 17.9% |
D3
medium
residues 253-305
Domain cluster:
rep: hypothetical_protein_McnAVgp009__NP_613092__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D287-336
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 42.8 | 4.10e-11 | 100.0% | 7.4% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o75A02 | 2.30.30.470 | Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B | 0.70 | 38.0 | 2.96e-01 | 98.1% | 25.0% |
| 1ev0A00 | 3.30.1070.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE | 0.67 | 44.0 | 4.30e-01 | 100.0% | 62.1% |
| 1nqzA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.61 | 49.0 | 3.45e-01 | 90.6% | 75.4% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.63e-01 | 90.6% | 81.7% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.58 | 49.0 | 4.62e-01 | 100.0% | 79.4% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 47.0 | 2.72e-01 | 90.6% | 85.9% |
| 4zg5A00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.56 | 47.0 | 3.09e-01 | 96.2% | 73.7% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.56 | 40.0 | 3.64e-01 | 81.1% | 97.4% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.55 | 39.0 | 3.61e-01 | 81.1% | 89.6% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.54 | 39.0 | 3.59e-01 | 79.2% | 93.3% |
| 3klqA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.38e-01 | 96.2% | 87.4% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 41.0 | 3.42e-01 | 94.3% | 62.7% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.51 | 42.0 | 2.80e-01 | 96.2% | 73.9% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.51 | 38.0 | 3.21e-01 | 96.2% | 46.3% |
| 6qdws00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.51 | 42.0 | 3.46e-01 | 100.0% | 70.6% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.51 | 38.0 | 3.64e-01 | 84.9% | 71.2% |
| 2k5qA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.51 | 33.0 | 2.78e-01 | 84.9% | 33.3% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.50 | 40.0 | 3.13e-01 | 100.0% | 39.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3422000 | 11.1.5.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sec23_BS | 0.68 | 37.0 | 2.98e-01 | 71.7% | 25.7% |
| 3246937 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 46.0 | 4.30e-01 | 100.0% | 57.1% |
| 4025866 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 44.0 | 2.68e-01 | 71.7% | 94.8% |
| 4499424 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.64 | 42.0 | 3.91e-01 | 100.0% | 51.4% |
| 3717029 | 109.4.1.116 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc | 0.64 | 50.0 | 2.91e-01 | 86.8% | 28.5% |
| 3520893 | 109.4.1.1812 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR, RIH_assoc | 0.63 | 50.0 | 2.67e-01 | 90.6% | 10.6% |
| 4002747 | 109.4.1.1812 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR, RIH_assoc | 0.63 | 49.0 | 2.62e-01 | 88.7% | 12.1% |
| 3453229 | 812.1.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain | 0.62 | 44.0 | 4.36e-01 | 100.0% | 74.5% |
| 3711526 | 210.1.2.8 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 | 0.62 | 46.0 | 2.84e-01 | 81.1% | 29.9% |
| 4944834 | 3625.1.1.0 ↗ | alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain | 0.62 | 43.0 | 3.49e-01 | 75.5% | 53.6% |
| 3609205 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.60 | 38.0 | 2.38e-01 | 71.7% | 12.2% |
| 5069260 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.59 | 38.0 | 3.88e-01 | 96.2% | 68.0% |
| 4012111 | 812.2.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain | 0.59 | 51.0 | 4.85e-01 | 100.0% | 85.7% |
| 5057064 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.59 | 44.0 | 3.59e-01 | 84.9% | 78.2% |
| 3406671 | 59.1.1.11 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Paf1 | 0.58 | 41.0 | 3.02e-01 | 100.0% | 25.6% |
| 4443502 | 109.4.1.116 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc | 0.58 | 44.0 | 2.59e-01 | 90.6% | 28.4% |
| 3919355 | 109.4.1.116 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc | 0.57 | 44.0 | 2.74e-01 | 90.6% | 42.7% |
| 7696 | 812.2.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain › Cyanate_lyase | 0.57 | 49.0 | 4.52e-01 | 100.0% | 77.1% |
| 4944882 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.56 | 33.0 | 3.38e-01 | 92.5% | 54.0% |
| 4068568 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.55 | 45.0 | 2.97e-01 | 94.3% | 69.9% |
| 3602516 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.55 | 45.0 | 2.96e-01 | 96.2% | 71.7% |
| 4262649 | 812.2.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain › Cyanate_lyase | 0.55 | 46.0 | 4.11e-01 | 100.0% | 67.5% |
| 3627056 | 519.1.1.1 ↗ | a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS | 0.55 | 38.0 | 3.03e-01 | 90.6% | 34.5% |
| 4489568 | 140.1.1.21 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e, CysS_C | 0.54 | 39.0 | 2.66e-01 | 77.4% | 64.0% |
| 5060239 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.54 | 44.0 | 2.93e-01 | 96.2% | 74.6% |
| 4797758 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 33.0 | 3.72e-01 | 71.7% | 83.3% |
| 4943515 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.54 | 44.0 | 2.90e-01 | 94.3% | 77.6% |
| 4682927 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.53 | 44.0 | 2.90e-01 | 96.2% | 70.6% |
| 4021130 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.53 | 39.0 | 2.74e-01 | 100.0% | 22.5% |
| 3693404 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.53 | 39.0 | 2.74e-01 | 81.1% | 26.8% |
| 3370568 | 4111.1.1.0 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like | 0.52 | 32.0 | 2.68e-01 | 90.6% | 30.5% |
| 3604748 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 45.0 | 3.01e-01 | 98.1% | 91.6% |
| 4635225 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.52 | 43.0 | 2.81e-01 | 96.2% | 71.9% |
| 3583595 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.52 | 46.0 | 4.40e-01 | 98.1% | 98.3% |
| 3701641 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 38.0 | 2.46e-01 | 81.1% | 86.9% |
| 5031154 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.51 | 33.0 | 3.19e-01 | 98.1% | 55.0% |
D4
medium
residues 404-476
Domain cluster:
rep: efp__YP_009121808__Spodoptera_frugiperda_granulovirus__307454__D424-487
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 57.8 | 1.20e-15 | 100.0% | 11.2% |