←Back to structures

envelope_fusion_protein

Euk-Vir

Operophtera_brumata_nucleopolyhedrovirus

envelope_fusion_protein__YP_009552688__Operophtera_brumata_nucleopolyhedrovirus__1046267

Identity

Accession:
YP_009552688 ↗
Protein ID:
envelope_fusion_protein
Kingdom:
euk

Quality

66.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Operophtera_brumata_nucleopolyhedrovirus

TaxID: 1046267

Cluster

View cluster (44 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-60_419-532_544-561
PDB
D2 medium residues 61-76_337-418
PDB
Domain cluster: rep: F-protein__YP_009316158__Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus__268591__D313-389
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12259.14 best Baculo_F 84.1 1.30e-23 100.0% 13.1%
D3 medium residues 77-154_183-276
PDB
Domain cluster: rep: F_protein__YP_009165735__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D49-139_173-272
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12259.14 best Baculo_F 81.3 8.80e-23 59.3% 15.1%
D4 medium residues 277-336
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12259.14 best Baculo_F 48.8 6.20e-13 100.0% 9.7%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 34.0 2.61e-01 100.0% 21.7%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.61 51.0 4.92e-01 100.0% 83.8%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.60 51.0 3.56e-01 100.0% 65.9%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.67e-01 91.7% 44.3%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 44.0 3.27e-01 86.7% 78.4%
3by5A00 3.30.420.180 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain 0.57 38.0 3.05e-01 100.0% 33.3%
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.55 39.0 3.63e-01 73.3% 96.0%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 3.44e-01 100.0% 60.0%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 32.0 2.89e-01 100.0% 38.0%
6nvxB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.53 38.0 3.56e-01 78.3% 92.2%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 35.0 2.38e-01 70.0% 91.5%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.31e-01 90.0% 48.8%
1fm2B03 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.52 36.0 3.55e-01 73.3% 72.7%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 40.0 2.70e-01 88.3% 76.8%
6s6yD02 3.30.70.520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 44.0 3.37e-01 100.0% 43.0%
3n77A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 40.0 3.22e-01 100.0% 39.7%
1ilvA00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.51 39.0 2.77e-01 90.0% 89.4%
5xc5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 3.24e-01 100.0% 91.0%
2hxsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 36.0 2.76e-01 80.0% 93.8%
1o75A02 2.30.30.470 Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B 0.50 34.0 2.74e-01 100.0% 37.5%
2v1yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 41.0 3.72e-01 96.7% 69.7%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4012111 812.2.1.0 ↗ a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain 0.67 55.0 5.42e-01 100.0% 87.3%
3717029 109.4.1.116 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc 0.60 45.0 2.67e-01 81.7% 28.9%
6230 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.58 44.0 3.27e-01 86.7% 78.4%
3480534 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 43.0 3.60e-01 86.7% 55.8%
5031154 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.57 36.0 3.63e-01 100.0% 63.3%
3225917 2498.1.1.23 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 0.57 44.0 2.50e-01 86.7% 24.7%
4944882 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.56 31.0 3.36e-01 95.0% 58.0%
4002747 109.4.1.1812 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR, RIH_assoc 0.56 44.0 2.40e-01 90.0% 12.3%
3518019 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.56 43.0 3.43e-01 88.3% 47.9%
3933352 263.1.1.10 ↗ a+b three layers › SRF-like › SRF-like › SRF-like › DM 0.55 35.0 3.31e-01 100.0% 53.4%
3622028 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.55 46.0 3.61e-01 98.3% 58.6%
4443502 109.4.1.116 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc 0.54 41.0 2.43e-01 86.7% 28.6%
4068568 7527.1.1.1 ↗ a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE 0.54 42.0 2.92e-01 91.7% 86.3%
4499424 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.53 38.0 3.68e-01 100.0% 67.1%
3779781 109.4.1.1812 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR, RIH_assoc 0.53 41.0 2.26e-01 86.7% 15.5%
3919355 109.4.1.116 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc 0.53 41.0 2.58e-01 86.7% 43.0%
4489568 140.1.1.21 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e, CysS_C 0.53 37.0 2.59e-01 73.3% 64.5%
3268814 298.1.1.15 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C 0.52 37.0 2.56e-01 78.3% 84.5%
4245032 192.11.1.2 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › CysS_C 0.52 38.0 2.61e-01 78.3% 64.8%
2555628 304.21.1.1 ↗ a+b two layers › Alpha-beta plaits › Formylmethanofuran:tetrahydromethanopterin formyltransferase › Formylmethanofuran:tetrahydromethanopterin formyltransferase › FTR 0.51 44.0 3.37e-01 100.0% 43.0%
4682927 7527.1.1.1 ↗ a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE 0.51 39.0 2.73e-01 90.0% 86.3%
3704741 148.1.3.174 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RHSP 0.51 36.0 2.87e-01 98.3% 36.0%