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envelope_glycoprotein_B-1
Euk-VirLeporid_alphaherpesvirus_4
envelope_glycoprotein_B-1__YP_009230158__Leporid_alphaherpesvirus_4__481315
Identity
- Accession:
- YP_009230158 ↗
- Protein ID:
- envelope_glycoprotein_B-1
- Kingdom:
- euk
Quality
69.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Leporid_alphaherpesvirus_4
TaxID: 481315
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 130-141_352-461_476-503
Domain cluster:
rep: BALF4__YP_010084703__Lymphocryptovirus_Macaca_pfe-lcl-E3__1716044__D77-88_295-391
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17417.9 best | Glycoprot_B_PH2 | 115.8 | 1.20e-33 | 65.3% | 100.0% |
D2
medium
residues 99-121_508-574
Domain cluster:
rep: hypothetical_protein_BA82_gp099__YP_009001572__Anomala_cuprea_entomopoxvirus__62099__D14-49_268-340
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00606.24 best | Glycoprotein_B | 88.7 | 5.40e-25 | 82.2% | 29.3% |
D3
medium
residues 145-262
Domain cluster:
rep: envelope_glycoprotein_B__YP_009344884__Murine_roseolovirus__1940555__D81-138_150-207
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17416.9 best | Glycoprot_B_PH1 | 126.6 | 1.50e-36 | 100.0% | 55.2% |
D4
medium
residues 263-351_679-706
Domain cluster:
rep: Cy89__YP_009337505__Cynomolgus_cytomegalovirus__1919083__D227-314_636-647
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17416.9 best | Glycoprot_B_PH1 | 84.4 | 1.30e-23 | 76.9% | 41.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2530507 | 220.3.1.3 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 | 0.97 | 72.0 | 5.59e-01 | 76.1% | 40.4% |
| 3892200 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.52 | 37.0 | 3.03e-01 | 75.2% | 82.6% |
D5
medium
residues 575-646
Domain cluster:
rep: envelope_glycoprotein_B__YP_009342376__Spheniscid_alphaherpesvirus_1__2560777__D566-653
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00606.24 best | Glycoprotein_B | 86.7 | 2.30e-24 | 100.0% | 32.0% |