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envelope_glycoprotein_B
Euk-VirAteline_alphaherpesvirus_1
envelope_glycoprotein_B__YP_009361910__Ateline_alphaherpesvirus_1__35243
Identity
- Accession:
- YP_009361910 ↗
- Protein ID:
- envelope_glycoprotein_B
- Kingdom:
- euk
Quality
68.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Ateline_alphaherpesvirus_1
TaxID: 35243
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 111-145_584-686
Domain cluster:
rep: envelope_glycoprotein_B__YP_068330__Suid_alphaherpesvirus_1__10345__D109-133_596-685
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00606.24 best | Glycoprotein_B | 139.2 | 2.00e-40 | 97.1% | 48.2% |
D2
medium
residues 146-176_384-405_516-583
Domain cluster:
rep: hypothetical_protein_BA82_gp099__YP_009001572__Anomala_cuprea_entomopoxvirus__62099__D14-49_268-340
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00606.24 best | Glycoprotein_B | 79.2 | 4.60e-22 | 50.4% | 26.6% |
D3
medium
residues 177-296_367-383
Domain cluster:
rep: envelope_glycoprotein_B__YP_009344884__Murine_roseolovirus__1940555__D81-138_150-207
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17416.9 best | Glycoprot_B_PH1 | 124.4 | 7.10e-36 | 89.8% | 57.1% |
D4
medium
residues 406-498
Domain cluster:
rep: envelope_glycoprotein_B__NP_045331__Bovine_alphaherpesvirus_1__10320__D371-383_423-483
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17417.9 best | Glycoprot_B_PH2 | 76.1 | 3.00e-21 | 83.9% | 79.4% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.99 | 79.0 | 7.05e-01 | 82.8% | 62.8% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.89 | 67.0 | 6.26e-01 | 78.5% | 65.5% |
| 3fvcA03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.88 | 68.0 | 6.33e-01 | 80.6% | 67.3% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 28.0 | 3.80e-01 | 75.3% | 76.6% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.54 | 39.0 | 3.10e-01 | 79.6% | 37.0% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.51 | 35.0 | 3.52e-01 | 82.8% | 69.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4595166 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.54 | 41.0 | 3.21e-01 | 82.8% | 62.7% |
| 4945650 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.54 | 39.0 | 3.84e-01 | 80.6% | 70.0% |
| 3258651 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 43.0 | 2.85e-01 | 95.7% | 59.3% |
D5
medium
residues 722-782_809-823