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envelope_glycoprotein_B
Euk-VirCercopithecine_alphaherpesvirus_2
envelope_glycoprotein_B__YP_164470__Cercopithecine_alphaherpesvirus_2__10317
Identity
- Accession:
- YP_164470 ↗
- Protein ID:
- envelope_glycoprotein_B
- Kingdom:
- euk
Quality
69.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Cercopithecine_alphaherpesvirus_2
TaxID: 10317
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 138-340
Domain cluster:
rep: envelope_glycoprotein_B__YP_009052019__Elephant_endotheliotropic_herpesvirus_5__768738__D95-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17416.9 best | Glycoprot_B_PH1 | 248.7 | 6.50e-74 | 100.0% | 95.7% |
D2
medium
residues 479-549
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00606.24 best | Glycoprotein_B | 91.6 | 7.30e-26 | 91.5% | 29.3% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gumA02 | 1.20.5.1890 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.90 | 79.0 | 6.95e-01 | 94.4% | 66.3% |
| 3fvcA02 | 1.20.5.1890 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.89 | 79.0 | 6.92e-01 | 94.4% | 67.0% |