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envelope_glycoprotein_H
Euk-VirAotine_betaherpesvirus_1
envelope_glycoprotein_H__YP_004940092__Aotine_betaherpesvirus_1__50290
Identity
- Accession:
- YP_004940092 ↗
- Protein ID:
- envelope_glycoprotein_H
- Kingdom:
- euk
Quality
78.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Aotine_betaherpesvirus_1
TaxID: 50290
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 256-322_336-357
D2
medium
residues 323-335_358-429
Domain cluster:
rep: envelope_glycoprotein_H__YP_004940238__Saimiriine_betaherpesvirus_4__1535247__D338-401
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fnvA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.65 | 57.0 | 3.76e-01 | 100.0% | 36.9% |
| 3alfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 52.0 | 3.66e-01 | 95.3% | 41.7% |
| 2iu1A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 43.0 | 3.55e-01 | 94.1% | 75.3% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 42.0 | 3.39e-01 | 100.0% | 58.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4165759 | 109.2.1.35 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Hepar_II_III_N | 0.66 | 57.0 | 3.77e-01 | 100.0% | 55.6% |
| 3513297 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.57 | 47.0 | 4.55e-01 | 94.1% | 88.0% |
| 3781898 | 109.4.1.583 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi | 0.56 | 49.0 | 3.34e-01 | 100.0% | 66.2% |
D3
medium
residues 430-529
Domain cluster:
rep: envelope_glycoprotein_H__YP_009388523__Common_bottlenose_dolphin_gammaherpesvirus_1_strain_Sarasota__2022783__D447-588
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02489.22 best | Herpes_glycop_H | 57.7 | 1.20e-15 | 91.0% | 14.8% |
D4
medium
residues 530-668
Domain cluster:
rep: UL22__YP_003084400__Anatid_alphaherpesvirus_1__104388__D647-783
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17488.8 best | Herpes_glycoH_C | 106.3 | 1.60e-30 | 100.0% | 97.9% |