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envelope_glycoprotein_H
Euk-VirFruit_bat_alphaherpesvirus_1
envelope_glycoprotein_H__YP_009042084__Fruit_bat_alphaherpesvirus_1__1343901
Identity
- Accession:
- YP_009042084 ↗
- Protein ID:
- envelope_glycoprotein_H
- Kingdom:
- euk
Quality
77.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Pteropodid_alphaherpesvirus_1
TaxID: 1343901
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 56-134
D2
medium
residues 163-212_227-348_450-466
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gszA05 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.56 | 25.0 | 3.76e-01 | 90.5% | 97.6% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 21.0 | 3.14e-01 | 77.2% | 80.2% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 25.0 | 2.88e-01 | 82.5% | 61.0% |
| 4js8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 24.0 | 3.46e-01 | 73.5% | 95.5% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.51 | 19.0 | 2.82e-01 | 82.5% | 80.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2095476 | 3146.1.1.1 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H | 0.88 | 85.0 | 5.80e-01 | 100.0% | 52.8% |
| 1554358 | 3146.1.1.1 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H | 0.82 | 79.0 | 5.37e-01 | 100.0% | 51.4% |
| 2095503 | 3146.1.1.1 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H | 0.59 | 54.0 | 3.88e-01 | 98.4% | 64.2% |
D3
medium
residues 349-449
Domain cluster:
rep: envelope_glycoprotein_H__YP_068353__Suid_alphaherpesvirus_1__10345__D240-339
D4
medium
residues 467-574
Domain cluster:
rep: envelope_glycoprotein_H__YP_009230153__Leporid_alphaherpesvirus_4__481315__D456-564
D5
medium
residues 575-674
Domain cluster:
rep: glycoprotein_H__YP_009227255__Macropodid_alphaherpesvirus_1__137443__D601-683
D6
medium
residues 675-839
Domain cluster:
rep: UL22__YP_003084400__Anatid_alphaherpesvirus_1__104388__D647-783
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17488.8 best | Herpes_glycoH_C | 30.9 | 2.80e-07 | 83.0% | 92.9% |