←Back to structures
envelope_glycoprotein_H
Euk-VirBeluga_whale_alphaherpesvirus_1
envelope_glycoprotein_H__YP_010084969__Beluga_whale_alphaherpesvirus_1__1434720
Identity
- Accession:
- YP_010084969 ↗
- Protein ID:
- envelope_glycoprotein_H
- Kingdom:
- euk
Quality
72.1
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Beluga_whale_alphaherpesvirus_1
TaxID: 1434720
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-104
D2
high
residues 638-792
Domain cluster:
rep: UL22__YP_003084400__Anatid_alphaherpesvirus_1__104388__D647-783
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17488.8 best | Herpes_glycoH_C | 56.1 | 4.60e-15 | 93.5% | 93.6% |
D3
medium
residues 128-159_212-312
Domain cluster:
rep: envelope_glycoprotein_H__YP_010087581__Cervid_alphaherpesvirus_3__2115790__D207-328
D4
medium
residues 313-454
Domain cluster:
rep: envelope_glycoprotein_H__YP_068353__Suid_alphaherpesvirus_1__10345__D240-339
D5
medium
residues 455-630
Domain cluster:
rep: envelope_glycoprotein_H__YP_053085__Equid_alphaherpesvirus_1__10326__D464-476_499-660
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02489.22 best | Herpes_glycop_H | 35.0 | 9.50e-09 | 88.1% | 22.4% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xqyA02 | 1.20.58.1340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 58.0 | 6.49e-01 | 96.6% | 86.7% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.62 | 38.0 | 4.51e-01 | 71.0% | 91.4% |
| 1xqrA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 47.0 | 4.06e-01 | 100.0% | 56.9% |
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 43.0 | 4.08e-01 | 100.0% | 65.1% |
| 4flbA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 40.0 | 4.51e-01 | 98.9% | 95.4% |
| 3dadA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 46.0 | 3.79e-01 | 99.4% | 47.8% |
| 3ut4A00 | 1.25.40.750 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Domain of unknown function DUF5071 | 0.56 | 39.0 | 4.42e-01 | 100.0% | 97.7% |
| 5vjcA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 48.0 | 4.23e-01 | 95.5% | 69.1% |
| 1q2zA00 | 1.25.40.240 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain | 0.54 | 37.0 | 4.25e-01 | 75.6% | 99.2% |
| 2of3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 47.0 | 4.11e-01 | 95.5% | 68.0% |
| 3opbA01 | 1.25.10.100 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.53 | 46.0 | 3.97e-01 | 95.5% | 79.2% |
| 2h7oA01 | 1.20.120.1330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain | 0.53 | 37.0 | 4.29e-01 | 74.4% | 100.0% |
| 1hzfA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 48.0 | 4.03e-01 | 99.4% | 64.9% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.52 | 22.0 | 1.83e-01 | 86.9% | 21.4% |
| 2yinA01 | 1.25.40.410 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A | 0.52 | 36.0 | 4.14e-01 | 80.7% | 96.9% |
| 4fjqA02 | 1.50.10.130 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain | 0.51 | 39.0 | 4.06e-01 | 98.3% | 86.4% |
| 4kx7A04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.50 | 46.0 | 3.78e-01 | 100.0% | 58.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2095476 | 3146.1.1.1 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H | 0.87 | 82.0 | 5.46e-01 | 99.4% | 29.9% |
| 1554358 | 3146.1.1.1 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H | 0.86 | 80.0 | 5.35e-01 | 100.0% | 29.0% |
| 119302 | 3146.1.1.0 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain | 0.84 | 58.0 | 4.60e-01 | 96.6% | 37.3% |
| 3679011 | 109.4.1.457 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Urb2 | 0.66 | 56.0 | 3.21e-01 | 93.2% | 18.9% |
| 3221764 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.65 | 31.0 | 4.42e-01 | 71.0% | 100.0% |
| 3197491 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 48.0 | 4.90e-01 | 100.0% | 85.1% |
| 3488533 | 109.4.1.365 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTTN_N | 0.59 | 42.0 | 4.76e-01 | 88.1% | 98.5% |
| 3872918 | 109.4.1.1286 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 | 0.59 | 44.0 | 4.18e-01 | 100.0% | 64.7% |
| 3209574 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.58 | 53.0 | 3.69e-01 | 99.4% | 36.8% |
| 3277865 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 40.0 | 4.48e-01 | 90.3% | 90.4% |
| 3619516 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 53.0 | 4.65e-01 | 100.0% | 74.5% |
| 4017588 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 39.0 | 4.32e-01 | 81.2% | 87.9% |
| 3191797 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 48.0 | 4.70e-01 | 96.0% | 83.2% |
| 5018410 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.56 | 48.0 | 4.48e-01 | 100.0% | 75.3% |
| 3274991 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 46.0 | 3.86e-01 | 100.0% | 51.0% |
| 3169906 | 109.4.1.1391 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec10_HB, Sec10_N | 0.55 | 49.0 | 3.36e-01 | 97.2% | 40.3% |
| 3800352 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 47.0 | 3.37e-01 | 94.9% | 39.6% |
| 4099511 | 109.4.1.228 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo84_C | 0.54 | 45.0 | 3.98e-01 | 86.9% | 61.4% |
| 3739798 | 109.4.1.1158 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IPO11 | 0.54 | 45.0 | 3.83e-01 | 100.0% | 54.8% |
| 4223250 | 109.4.1.112 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Xpo1 | 0.53 | 49.0 | 4.10e-01 | 100.0% | 67.0% |
| 3743147 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 48.0 | 3.50e-01 | 99.4% | 38.7% |
| 4082855 | 106.1.1.4 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Rsbr_N | 0.52 | 30.0 | 3.30e-01 | 77.8% | 67.9% |
| 5049102 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.50 | 27.0 | 2.67e-01 | 93.2% | 45.3% |