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envelope_glycoprotein_H

Euk-Vir

Cercopithecine_alphaherpesvirus_2

envelope_glycoprotein_H__YP_164464__Cercopithecine_alphaherpesvirus_2__10317

Identity

Accession:: YP_164464 ↗
Protein ID:: envelope_glycoprotein_H
Kingdom:: euk

Quality

71.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Cercopithecine_alphaherpesvirus_2

TaxID: 10317

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 468-630

PDB

Domain cluster: rep: envelope_glycoprotein_H__YP_068353__Suid_alphaherpesvirus_1__10345__D340-467

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02489.22 best	Herpes_glycop_H	29.4	4.80e-07	87.1%	19.6%

D2 high residues 692-822

PDB

Domain cluster: rep: UL22__YP_003084400__Anatid_alphaherpesvirus_1__104388__D647-783

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17488.8 best	Herpes_glycoH_C	38.7	1.10e-09	97.0%	85.8%

D3 medium residues 181-196_249-375

PDB

Domain cluster: rep: envelope_glycoprotein_H__YP_010087581__Cervid_alphaherpesvirus_3__2115790__D207-328

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2xqyA01	3.30.500.50	Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 ›	0.78	48.0	4.41e-01	74.8%	49.4%
6fopA01	2.70.98.30	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4	0.62	49.0	4.19e-01	82.5%	88.1%
5e1qB01	2.70.98.10	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 ›	0.57	49.0	3.94e-01	92.3%	95.3%
4k35A02	2.70.98.30	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4	0.54	45.0	4.00e-01	90.2%	84.3%
5upiA01	2.70.98.30	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4	0.53	46.0	4.24e-01	94.4%	93.6%
2v7sA00	3.30.2030.20	Alpha Beta › 2-Layer Sandwich › TBP-like ›	0.50	36.0	3.45e-01	74.8%	63.9%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2095476	3146.1.1.1 ↗	a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H	0.91	89.0	5.63e-01	100.0%	33.0%
1554358	3146.1.1.1 ↗	a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H	0.88	84.0	5.34e-01	100.0%	32.2%
119302	3146.1.1.0 ↗	a+b complex topology › gH main domain › gH main domain › gH main domain	0.77	50.0	3.72e-01	100.0%	28.3%
2095503	3146.1.1.1 ↗	a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H	0.70	64.0	4.26e-01	97.2%	35.2%
3736590	9.14.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W	0.66	34.0	4.01e-01	83.9%	70.0%
3584281	12.3.1.13 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C	0.65	49.0	3.91e-01	79.7%	97.9%
4951804	881.1.1.0 ↗	a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like	0.57	40.0	4.05e-01	70.6%	97.1%
3188851	9.14.1.1 ↗	beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1	0.57	35.0	3.96e-01	83.2%	79.1%
4254206	12.3.1.22 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N	0.57	49.0	3.95e-01	93.0%	95.3%
5014686	809.2.1.0 ↗	a+b two layers › BLIP-like › BT0923-like › BT0923-like	0.57	23.0	3.26e-01	76.9%	85.5%
2389389	12.3.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich	0.56	47.0	4.12e-01	90.9%	78.5%
3286246	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.56	35.0	4.08e-01	86.0%	86.5%
3223040	12.3.1.13 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C	0.56	47.0	3.93e-01	92.3%	97.3%
4113893	12.3.1.34 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › SOGP_N	0.51	45.0	3.67e-01	94.4%	85.3%
2717534	12.3.1.31 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YgjK_N	0.51	44.0	3.53e-01	92.3%	86.1%
3875861	5.1.4.146 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.50	45.0	3.21e-01	99.3%	86.4%
4944443	3504.3.1.1 ↗	beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N	0.50	39.0	3.91e-01	81.8%	88.7%

D4 medium residues 237-248_376-461

PDB

Domain cluster: rep: envelope_glycoprotein_H__YP_068353__Suid_alphaherpesvirus_1__10345__D240-339