envelope_glycoprotein_K

Euk-Vir

Equid_alphaherpesvirus_1

envelope_glycoprotein_K__YP_053051__Equid_alphaherpesvirus_1__10326

Identity

76.7 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_1

TaxID: 10326

View cluster (31 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-114

PDB

Domain cluster: rep: envelope_glycoprotein_K__YP_010084935__Beluga_whale_alphaherpesvirus_1__1434720__D38-110

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01621.23 best	Fusion_gly_K	50.6	2.10e-13	100.0%	23.3%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ykiA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.54	45.0	4.20e-01	92.4%	96.0%
1b0uA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.53	42.0	3.03e-01	89.9%	85.3%
8fefH01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.53	41.0	2.91e-01	89.9%	70.7%
6bzrB01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.52	42.0	3.10e-01	91.1%	87.9%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3696994	7512.1.1.58 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › HET	0.58	41.0	3.25e-01	75.9%	69.9%
4948142	2002.1.1.224 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM	0.53	38.0	2.53e-01	77.2%	77.8%
4153209	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.52	41.0	3.03e-01	91.1%	82.0%
4947150	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.52	41.0	3.02e-01	91.1%	83.9%
4614023	2004.1.1.417 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21	0.52	41.0	3.00e-01	91.1%	84.3%
2541072	7524.1.1.1 ↗	a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh	0.51	39.0	2.91e-01	87.3%	72.6%
3411022	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.50	42.0	3.74e-01	93.7%	92.2%

D2 medium residues 1-29_115-151_209-276

PDB

Domain cluster: rep: envelope_glycoprotein_K__NP_944381__Psittacid_alphaherpesvirus_1__50294__D1-33_137-163_231-311

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01621.23 best	Fusion_gly_K	38.9	7.60e-10	51.5%	19.5%
PF01621.23	Fusion_gly_K	39.0	7.30e-10	38.1%	12.1%

D3 medium residues 152-208

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01621.23 best	Fusion_gly_K	52.0	7.90e-14	100.0%	16.2%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vw4T01	6.10.330.20	Special › Helix non-globular › Monooxygenase ›	0.75	53.0	4.22e-01	73.7%	62.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4339499	7502.1.1.0 ↗	a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS	0.67	37.0	3.40e-01	84.2%	40.0%
3234471	188.1.1.1 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep	0.63	50.0	3.29e-01	94.7%	22.8%
3238533	188.1.1.1 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep	0.62	52.0	3.36e-01	98.2%	29.9%
185487	101.1.1.23 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Peptidase_S48	0.58	41.0	3.59e-01	77.2%	46.8%