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envelope_glycoprotein_K

Euk-Vir

Suid_alphaherpesvirus_1

envelope_glycoprotein_K__YP_068321__Suid_alphaherpesvirus_1__10345

Identity

Accession:
YP_068321 ↗
Protein ID:
envelope_glycoprotein_K
Kingdom:
euk

Quality

79.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Suid_alphaherpesvirus_1

TaxID: 10345

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-89
PDB
Domain cluster: rep: envelope_glycoprotein_K__YP_010084935__Beluga_whale_alphaherpesvirus_1__1434720__D38-110
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5hkeA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.64 43.0 2.70e-01 70.4% 16.0%
4ad8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 42.0 2.74e-01 77.8% 61.5%
7dd0C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 38.0 2.54e-01 72.2% 25.7%
2npnA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.52 43.0 3.47e-01 94.4% 92.7%
1a9xB02 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 37.0 2.53e-01 94.4% 18.9%
1b0uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 35.0 2.35e-01 74.1% 25.6%
1ftkA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 42.0 3.53e-01 100.0% 99.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4477092 7591.1.1.1 ↗ a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK 0.65 52.0 4.28e-01 88.9% 93.0%
4978514 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.60 45.0 3.40e-01 81.5% 38.5%
4470898 2003.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_N 0.57 42.0 2.88e-01 81.5% 29.5%
4205751 2003.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_N 0.57 42.0 2.94e-01 81.5% 33.3%
3629614 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 40.0 3.30e-01 83.3% 92.5%
3980583 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.55 38.0 2.67e-01 72.2% 28.2%
3943105 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.55 37.0 2.15e-01 70.4% 11.3%
4218183 2004.1.1.417 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 0.54 38.0 2.61e-01 74.1% 27.8%
3942352 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.52 37.0 2.55e-01 77.8% 33.6%
3518193 2004.1.1.36 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N 0.50 41.0 2.69e-01 96.3% 25.2%
D2 medium residues 90-227
PDB
Domain cluster: rep: envelope_glycoprotein_K__YP_009046554__Falconid_herpesvirus_1__1510155__D119-243
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01621.23 best Fusion_gly_K 132.3 3.00e-38 100.0% 40.1%