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envelope_glycoprotein_L

Euk-Vir

Cercopithecine_alphaherpesvirus_9

envelope_glycoprotein_L__NP_077474__Cercopithecine_alphaherpesvirus_9__35246

Identity

Accession:
NP_077474 ↗
Protein ID:
envelope_glycoprotein_L
Kingdom:
euk

Quality

64.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Cercopithecine_alphaherpesvirus_9

TaxID: 35246

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-97
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05259.17 best Herpes_UL1 76.7 1.90e-21 94.6% 70.1%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m1cB01 3.30.390.170 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.84 72.0 6.23e-01 91.9% 63.3%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 46.0 4.65e-01 77.0% 64.9%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 43.0 4.55e-01 74.3% 69.7%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 43.0 4.48e-01 71.6% 68.7%
4wj7D00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 57.0 4.84e-01 91.9% 81.3%
2jraA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.59 30.0 3.71e-01 82.4% 83.3%
4egvA02 2.40.50.840 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 34.0 3.41e-01 100.0% 54.7%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.58 46.0 4.48e-01 100.0% 76.2%
1vw3B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 41.0 3.82e-01 74.3% 87.1%
1itxA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 47.0 4.76e-01 89.2% 97.3%
1w9pA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 42.0 4.50e-01 89.2% 96.8%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 45.0 4.58e-01 91.9% 95.9%
2v3aA03 3.30.390.120 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.54 35.0 3.70e-01 91.9% 76.6%
3abiA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 38.0 2.98e-01 77.0% 88.1%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.83e-01 90.5% 60.6%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 38.0 4.15e-01 87.8% 100.0%
2n88A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 30.0 3.23e-01 98.6% 67.2%
1e50B00 2.40.250.10 Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit 0.52 43.0 3.58e-01 90.5% 78.5%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.45e-01 90.5% 60.6%
3au0A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.38e-01 91.9% 65.8%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1556781 3146.1.1.2 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_UL1 0.89 78.0 6.24e-01 91.9% 51.5%
2095477 1170.1.2.2 ↗ beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) 0.84 72.0 5.72e-01 91.9% 49.6%
3556735 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.71 43.0 4.39e-01 74.3% 61.6%
3563619 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.69 58.0 4.57e-01 91.9% 67.3%
3591459 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 39.0 3.70e-01 91.9% 51.8%
4013690 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.60 39.0 4.31e-01 91.9% 89.1%
3880204 220.1.1.199 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NISCH_C 0.57 48.0 3.58e-01 90.5% 54.0%
3734800 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.56 47.0 2.90e-01 91.9% 98.5%
5049640 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 42.0 4.14e-01 100.0% 74.7%
3715264 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 46.0 3.90e-01 90.5% 75.0%
6500 284.2.1.1 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 0.55 46.0 4.63e-01 91.9% 100.0%
3700838 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 45.0 3.68e-01 90.5% 50.8%
3490407 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 43.0 2.76e-01 90.5% 96.5%
3992398 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.54 44.0 3.85e-01 90.5% 71.3%
3298632 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.54 44.0 3.95e-01 90.5% 65.0%
3742641 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.54 43.0 3.75e-01 90.5% 58.2%
3509508 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.54 43.0 3.96e-01 90.5% 67.4%
3930110 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 37.0 2.53e-01 74.3% 40.3%
5026482 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.53 43.0 2.80e-01 90.5% 29.9%
3789602 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.67e-01 90.5% 57.6%
3632189 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 32.0 3.34e-01 87.8% 66.2%
3219484 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.52 42.0 3.82e-01 90.5% 64.0%
3415950 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 41.0 3.81e-01 98.6% 67.4%
3482713 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.50e-01 90.5% 63.7%
3238811 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.51 44.0 2.97e-01 100.0% 45.4%
3921576 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 43.0 3.46e-01 91.9% 57.1%
3422527 708.1.1.8 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FAR1 0.51 42.0 3.63e-01 90.5% 81.7%
3782262 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.51 46.0 3.94e-01 100.0% 88.7%
4093535 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 42.0 3.49e-01 90.5% 51.5%
4220479 223.1.1.45 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GdpP_PAS 0.51 44.0 3.17e-01 97.3% 41.9%
4408783 223.1.1.45 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GdpP_PAS 0.50 44.0 4.09e-01 97.3% 94.7%
3254316 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.50 40.0 3.77e-01 87.8% 83.3%
4988948 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 44.0 3.79e-01 98.6% 73.3%
3599505 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.50 41.0 3.88e-01 90.5% 93.3%
D2 medium residues 98-175
PDB