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envelope_glycoprotein_L

Euk-Vir

Beluga_whale_alphaherpesvirus_1

envelope_glycoprotein_L__YP_010084929__Beluga_whale_alphaherpesvirus_1__1434720

Identity

Accession:
YP_010084929 ↗
Protein ID:
envelope_glycoprotein_L
Kingdom:
euk

Quality

53.4 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Beluga_whale_alphaherpesvirus_1

TaxID: 1434720

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 101-168
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05259.17 best Herpes_UL1 46.0 7.00e-12 94.1% 55.1%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m1cB01 3.30.390.170 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.81 74.0 6.23e-01 100.0% 66.1%
1atiB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.65 35.0 3.00e-01 88.2% 31.2%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 41.0 3.71e-01 83.8% 46.7%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.61 46.0 2.95e-01 82.4% 75.7%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.60 41.0 3.08e-01 72.1% 94.5%
1b9mB02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 34.0 3.35e-01 85.3% 51.4%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 37.0 3.84e-01 95.6% 66.2%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 40.0 3.58e-01 70.6% 51.5%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.59 35.0 4.20e-01 95.6% 93.2%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.58 41.0 3.70e-01 75.0% 100.0%
2x6nD00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 45.0 3.36e-01 85.3% 50.0%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 49.0 4.18e-01 100.0% 87.8%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 46.0 3.99e-01 95.6% 69.0%
2n88A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 40.0 4.26e-01 100.0% 93.1%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 43.0 3.89e-01 95.6% 59.6%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 33.0 3.54e-01 75.0% 69.6%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.79e-01 88.2% 85.6%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 44.0 3.71e-01 94.1% 51.6%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 43.0 3.60e-01 92.6% 61.2%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.54 41.0 2.82e-01 89.7% 79.5%
2vpjA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.54 45.0 3.05e-01 97.1% 97.6%
1x9mA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 43.0 3.13e-01 97.1% 66.8%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 41.0 3.34e-01 91.2% 47.2%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.99e-01 100.0% 81.5%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 38.0 3.29e-01 82.4% 81.2%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 2.87e-01 88.2% 84.3%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 34.0 3.25e-01 72.1% 56.8%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 34.0 3.11e-01 95.6% 47.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 34.0 3.36e-01 80.9% 65.3%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 39.0 3.61e-01 86.8% 75.8%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2095477 1170.1.2.2 ↗ beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) 0.82 74.0 5.75e-01 98.5% 51.8%
1556781 3146.1.1.2 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_UL1 0.81 75.0 5.92e-01 100.0% 53.8%
4932715 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.68 38.0 2.96e-01 91.2% 27.4%
3930986 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.65 45.0 3.98e-01 73.5% 62.9%
3930705 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.65 45.0 3.97e-01 72.1% 55.0%
4381621 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.64 37.0 2.65e-01 91.2% 19.5%
4025894 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 39.0 3.35e-01 79.4% 36.7%
3600862 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 38.0 3.64e-01 89.7% 51.2%
3284535 295.1.1.13 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3090 0.61 51.0 4.35e-01 97.1% 100.0%
3733718 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.61 41.0 3.86e-01 70.6% 62.4%
3602786 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.60 51.0 3.06e-01 97.1% 16.2%
4953226 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 43.0 4.42e-01 86.8% 80.0%
3618716 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.59 44.0 4.58e-01 94.1% 91.7%
3938255 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 48.0 3.28e-01 91.2% 47.9%
3166548 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.58 49.0 4.06e-01 97.1% 78.4%
5002449 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 34.0 3.68e-01 77.9% 69.1%
3186255 223.1.1.21 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like 0.58 50.0 3.28e-01 100.0% 90.6%
3672736 2484.1.1.9 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.57 46.0 3.43e-01 88.2% 55.4%
3926417 2484.1.1.9 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.57 44.0 3.37e-01 83.8% 58.7%
5051960 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 47.0 3.66e-01 92.6% 60.0%
2531649 5090.1.1.5 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Phlebovirus_G2 0.56 42.0 2.68e-01 80.9% 32.6%
3522958 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.55 48.0 3.09e-01 97.1% 90.1%
3774525 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 44.0 3.39e-01 94.1% 43.9%
3485727 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 43.0 4.01e-01 92.6% 82.1%
4039724 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.54 40.0 4.07e-01 79.4% 98.5%
4978295 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 46.0 2.81e-01 100.0% 56.2%
4998944 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 46.0 2.82e-01 100.0% 57.3%
3904569 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.54 44.0 3.78e-01 98.5% 70.4%
None — 0.54 43.0 3.36e-01 94.1% 46.5%
3356611 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.54 39.0 4.20e-01 86.8% 94.5%
3673032 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 42.0 4.16e-01 95.6% 85.7%
3448558 880.1.1.1 ↗ a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind 0.52 43.0 2.59e-01 94.1% 62.2%
2096143 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 3.67e-01 77.9% 88.6%
3789602 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.64e-01 97.1% 64.8%
3500968 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.51 43.0 2.69e-01 94.1% 94.5%
4937515 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.51 37.0 3.43e-01 77.9% 60.0%
3584264 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 43.0 3.64e-01 100.0% 66.4%
4001707 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.50 35.0 3.23e-01 72.1% 64.7%