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envelope_glycoprotein_UL130
Euk-VirCercopithecine_betaherpesvirus_5
envelope_glycoprotein_UL130__YP_004936084__Cercopithecine_betaherpesvirus_5__50292
Identity
- Accession:
- YP_004936084 ↗
- Protein ID:
- envelope_glycoprotein_UL130
- Kingdom:
- euk
Quality
69.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cercopithecine_betaherpesvirus_5
TaxID: 50292
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-106
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11668.14 best | Gp_UL130 | 47.4 | 2.90e-12 | 97.0% | 33.3% |
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.88 | 61.0 | 6.19e-01 | 75.8% | 72.7% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.78 | 55.0 | 5.60e-01 | 74.2% | 74.2% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 51.0 | 5.32e-01 | 72.7% | 77.0% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 44.0 | 4.69e-01 | 74.2% | 75.0% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 49.0 | 4.65e-01 | 75.8% | 64.6% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 47.0 | 4.03e-01 | 72.7% | 52.9% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 41.0 | 3.93e-01 | 71.2% | 52.6% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.65 | 49.0 | 4.21e-01 | 80.3% | 84.6% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 50.0 | 4.43e-01 | 87.9% | 56.6% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 45.0 | 3.83e-01 | 74.2% | 47.3% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 45.0 | 4.09e-01 | 74.2% | 57.0% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 44.0 | 3.78e-01 | 74.2% | 46.8% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 44.0 | 3.63e-01 | 74.2% | 47.9% |
| 3i6eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 44.0 | 3.82e-01 | 74.2% | 60.2% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.62 | 42.0 | 4.01e-01 | 71.2% | 58.7% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 44.0 | 3.58e-01 | 75.8% | 50.4% |
| 2gdqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 44.0 | 3.69e-01 | 74.2% | 64.5% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 47.0 | 3.82e-01 | 83.3% | 80.8% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.61 | 45.0 | 3.40e-01 | 80.3% | 53.2% |
| 3ro6C01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 43.0 | 3.70e-01 | 74.2% | 55.7% |
| 5mteA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.60 | 45.0 | 3.60e-01 | 81.8% | 59.9% |
| 1lm4A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.60 | 44.0 | 3.24e-01 | 80.3% | 47.4% |
| 2lkoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 42.0 | 3.41e-01 | 75.8% | 40.6% |
| 3bjsA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 43.0 | 3.54e-01 | 75.8% | 59.0% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 39.0 | 4.43e-01 | 71.2% | 91.8% |
| 2nqlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 43.0 | 3.19e-01 | 75.8% | 53.0% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.59 | 42.0 | 3.32e-01 | 74.2% | 80.7% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.59 | 41.0 | 3.28e-01 | 72.7% | 64.7% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 45.0 | 3.58e-01 | 81.8% | 78.5% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 42.0 | 3.52e-01 | 75.8% | 52.3% |
| 3go2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 41.0 | 3.50e-01 | 75.8% | 49.1% |
| 2l73A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 44.0 | 3.45e-01 | 83.3% | 72.0% |
| 3mkcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 41.0 | 3.20e-01 | 75.8% | 43.8% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 42.0 | 4.12e-01 | 81.8% | 76.4% |
| 3deeA02 | 3.90.930.50 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.56 | 47.0 | 3.90e-01 | 92.4% | 54.4% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 37.0 | 3.70e-01 | 71.2% | 64.8% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 38.0 | 3.80e-01 | 71.2% | 70.1% |
| 3sszA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 39.0 | 3.14e-01 | 74.2% | 51.1% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.54 | 41.0 | 4.05e-01 | 83.3% | 83.1% |
| 1rl4B00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.54 | 46.0 | 3.55e-01 | 98.5% | 64.7% |
| 5t1dB00 | 3.10.390.20 | Alpha Beta › Roll › SAND domain › Viral glycoprotein L | 0.54 | 40.0 | 3.52e-01 | 80.3% | 55.6% |
| 6jy5B00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.54 | 43.0 | 4.08e-01 | 92.4% | 100.0% |
| 3qu1A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.53 | 46.0 | 3.44e-01 | 98.5% | 62.5% |
| 3ic9A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 32.0 | 2.75e-01 | 72.7% | 32.0% |
| 4euyA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 34.0 | 3.21e-01 | 71.2% | 89.5% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2095508 | 1170.1.2.4 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › Gp_UL130 | 0.95 | 69.0 | 6.64e-01 | 75.8% | 67.6% |
| 5011439 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.74 | 51.0 | 3.95e-01 | 72.7% | 36.6% |
| 4994410 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 49.0 | 4.47e-01 | 72.7% | 63.5% |
| 3990293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.69 | 47.0 | 5.09e-01 | 72.7% | 87.3% |
| 3589473 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 52.0 | 4.87e-01 | 84.8% | 68.8% |
| 4971091 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.67 | 47.0 | 3.79e-01 | 75.8% | 85.9% |
| 5023580 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 45.0 | 4.56e-01 | 74.2% | 70.8% |
| 3937661 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 46.0 | 4.67e-01 | 72.7% | 81.5% |
| 3971840 | 101.1.2.379 ↗ | alpha arrays › HTH › HTH › winged helix domain › NGO1945_C | 0.66 | 47.0 | 3.86e-01 | 74.2% | 91.3% |
| 3744517 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.66 | 47.0 | 3.82e-01 | 74.2% | 75.8% |
| 4945655 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 45.0 | 3.96e-01 | 72.7% | 50.0% |
| 3787501 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.65 | 47.0 | 3.68e-01 | 75.8% | 87.1% |
| 3542914 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.65 | 50.0 | 4.06e-01 | 81.8% | 74.2% |
| 3641570 | 3131.1.1.1 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC | 0.65 | 45.0 | 3.48e-01 | 72.7% | 52.0% |
| 3952939 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.65 | 46.0 | 4.45e-01 | 75.8% | 92.0% |
| 3439990 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.64 | 46.0 | 4.15e-01 | 75.8% | 58.9% |
| 5064060 | 896.1.1.4 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 | 0.64 | 44.0 | 4.40e-01 | 72.7% | 82.9% |
| 4667221 | 2003.1.2.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 | 0.64 | 49.0 | 3.46e-01 | 81.8% | 56.2% |
| 3564088 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 46.0 | 3.93e-01 | 77.3% | 68.2% |
| 3544563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 48.0 | 4.17e-01 | 83.3% | 69.5% |
| 869258 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.63 | 44.0 | 3.72e-01 | 74.2% | 51.4% |
| 4997916 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.62 | 43.0 | 3.26e-01 | 72.7% | 86.9% |
| 3785687 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.62 | 50.0 | 4.20e-01 | 89.4% | 55.7% |
| 3598206 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 54.0 | 4.60e-01 | 100.0% | 73.6% |
| 4936963 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 43.0 | 4.00e-01 | 74.2% | 62.4% |
| 4435672 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.61 | 42.0 | 4.28e-01 | 74.2% | 72.3% |
| 3836701 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.61 | 49.0 | 3.78e-01 | 87.9% | 40.5% |
| 5000042 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.61 | 42.0 | 3.01e-01 | 72.7% | 69.3% |
| 3604459 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.61 | 41.0 | 3.55e-01 | 71.2% | 45.5% |
| 4968816 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.61 | 43.0 | 3.81e-01 | 74.2% | 53.7% |
| 3368743 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 42.0 | 4.33e-01 | 72.7% | 95.0% |
| 3365937 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.60 | 42.0 | 4.32e-01 | 72.7% | 95.0% |
| 3719807 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 47.0 | 3.74e-01 | 86.4% | 87.1% |
| 4119875 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.60 | 41.0 | 4.17e-01 | 74.2% | 72.3% |
| 3210606 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.60 | 48.0 | 3.93e-01 | 89.4% | 49.6% |
| 3422528 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 45.0 | 4.72e-01 | 83.3% | 90.0% |
| 1242000 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.59 | 43.0 | 3.44e-01 | 75.8% | 54.3% |
| 3222570 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 45.0 | 3.78e-01 | 81.8% | 47.0% |
| 4349950 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 40.0 | 4.19e-01 | 74.2% | 76.7% |
| None | — | 0.59 | 47.0 | 2.88e-01 | 84.8% | 83.9% | |
| 3506301 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.59 | 47.0 | 3.45e-01 | 87.9% | 68.6% |
| 3217717 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 46.0 | 2.80e-01 | 84.8% | 70.4% |
| 5075515 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 41.0 | 3.45e-01 | 74.2% | 46.7% |
| 3347210 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 44.0 | 4.10e-01 | 83.3% | 96.6% |
| 4674129 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 47.0 | 4.06e-01 | 89.4% | 70.5% |
| 3163827 | 3551.1.1.1 ↗ | alpha arrays › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › NGO1945_C | 0.58 | 45.0 | 3.75e-01 | 83.3% | 96.6% |
| 4931302 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.57 | 40.0 | 4.49e-01 | 77.3% | 98.0% |
| 4320111 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.57 | 41.0 | 3.57e-01 | 75.8% | 56.0% |
| 5018124 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.57 | 40.0 | 3.72e-01 | 74.2% | 80.0% |
| 1174601 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.57 | 41.0 | 3.33e-01 | 75.8% | 49.6% |
| 3234621 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.57 | 47.0 | 3.81e-01 | 93.9% | 47.4% |
| 4426619 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.57 | 41.0 | 3.62e-01 | 75.8% | 57.9% |
| 4443040 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 39.0 | 3.35e-01 | 71.2% | 46.2% |
| 3828973 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.57 | 38.0 | 3.92e-01 | 71.2% | 75.4% |
| 5022543 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.56 | 39.0 | 2.37e-01 | 74.2% | 10.1% |
| 5075211 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.56 | 38.0 | 4.12e-01 | 80.3% | 96.0% |
| 5002178 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.56 | 38.0 | 4.25e-01 | 72.7% | 94.0% |
| 3920905 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.56 | 39.0 | 3.31e-01 | 77.3% | 53.2% |
| 185160 | 3551.1.1.1 ↗ | alpha arrays › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › NGO1945_C | 0.56 | 47.0 | 3.93e-01 | 92.4% | 55.9% |
| 3364309 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.55 | 44.0 | 3.66e-01 | 98.5% | 47.7% |
| 3605378 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.55 | 38.0 | 3.29e-01 | 74.2% | 76.4% |
| 3654790 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 38.0 | 4.02e-01 | 74.2% | 85.0% |
| 4443928 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.54 | 44.0 | 3.29e-01 | 95.5% | 67.9% |
| 1936538 | 3146.1.1.3 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Phage_glycop_gL | 0.54 | 40.0 | 3.52e-01 | 80.3% | 55.6% |
| 3942738 | 295.1.1.29 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ | 0.53 | 41.0 | 3.23e-01 | 87.9% | 37.4% |
| 1141950 | 3449.1.1.1 ↗ | a+b two layers › Cpn0803 › Cpn0803 › Cpn0803 › CT_584-like | 0.53 | 43.0 | 3.13e-01 | 87.9% | 38.3% |
| 3837131 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.53 | 37.0 | 3.27e-01 | 75.8% | 66.7% |
| 3275667 | 5.1.5.76 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N | 0.52 | 40.0 | 2.50e-01 | 84.8% | 22.0% |
| 4262428 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.51 | 39.0 | 2.66e-01 | 90.9% | 23.9% |
| 4023515 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 35.0 | 2.23e-01 | 75.8% | 46.6% |
D2
medium
residues 107-198