←Back to structures

envelope_glycoprotein_UL37

Euk-Vir

Saimiriine_betaherpesvirus_4

envelope_glycoprotein_UL37__YP_004940209__Saimiriine_betaherpesvirus_4__1535247

Identity

Accession:
YP_004940209 ↗
Protein ID:
envelope_glycoprotein_UL37
Kingdom:
euk

Quality

66.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Saimiriine_betaherpesvirus_4

TaxID: 1535247

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-285
PDB
Domain cluster: rep: Glycoprotein_present_at_IE_times__YP_214049__Murid_betaherpesvirus_1__10366__D54-269
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07413.17 best Herpes_UL37_2 33.4 3.60e-08 97.2% 41.9%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jvgA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.75 58.0 6.44e-01 86.4% 98.3%
1zt4C01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.75 59.0 6.44e-01 86.4% 96.6%
1kcgC00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.74 55.0 6.19e-01 85.5% 96.5%
1a6zA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.73 58.0 6.31e-01 86.0% 97.2%
1hyrC01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.71 56.0 6.13e-01 86.0% 97.2%
3fruA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.71 55.0 6.01e-01 86.4% 97.2%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.70 51.0 5.81e-01 85.5% 98.2%
7zqiA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.68 54.0 5.85e-01 86.4% 97.8%
4iiqC02 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.68 53.0 5.77e-01 86.0% 96.6%
1zs8A01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.67 51.0 5.60e-01 86.0% 96.5%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.52 31.0 2.80e-01 76.2% 41.1%
2fs2B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 28.0 3.37e-01 86.0% 77.5%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 32.0 3.53e-01 78.0% 75.7%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 27.0 3.37e-01 85.5% 85.5%
2okxA04 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.50 22.0 3.25e-01 79.0% 93.5%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3859354 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.74 58.0 6.28e-01 86.0% 95.6%
3752681 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.74 58.0 6.18e-01 86.0% 91.6%
3842370 233.1.1.0 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain 0.73 56.0 6.16e-01 85.0% 96.0%
3521727 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.72 56.0 6.08e-01 85.5% 93.0%
3553889 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.72 57.0 5.99e-01 86.0% 89.7%
3917386 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.70 54.0 5.98e-01 86.0% 97.1%
3863169 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.68 54.0 5.95e-01 86.0% 100.0%
3847239 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.68 56.0 6.04e-01 86.0% 98.4%
3907478 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.65 52.0 5.59e-01 86.4% 97.2%
3414586 11.1.1.824 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chitin_bind_4 0.58 24.0 3.63e-01 92.5% 89.2%
4318843 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.55 33.0 3.90e-01 78.5% 84.8%
3273410 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.52 37.0 3.95e-01 79.0% 82.2%
3270456 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.51 36.0 3.77e-01 80.8% 76.9%
3287036 331.3.1.27 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.51 36.0 3.93e-01 83.2% 88.2%
3818841 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.51 36.0 3.79e-01 79.4% 79.5%
3952882 331.3.1.27 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.51 36.0 4.00e-01 83.2% 89.1%