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envelope_protein_E1
Euk-VirBat_hepacivirus
envelope_protein_E1__YP_009664184__Bat_hepacivirus__1325446
Identity
- Accession:
- YP_009664184 ↗
- Protein ID:
- envelope_protein_E1
- Kingdom:
- euk
Quality
69.2
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Hepacivirus›
Bat_hepacivirus
TaxID: 1325446
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-58_105-119
Domain cluster:
rep: envelope_protein_E1__YP_009684355__Guereza_hepacivirus__1354498__D31-77_120-138
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01539.23 best | HCV_env | 22.2 | 1.40e-04 | 90.4% | 27.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 29.0 | 3.63e-01 | 94.5% | 76.1% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.52 | 37.0 | 3.90e-01 | 82.2% | 84.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3058711 | 6042.1.1.1 ↗ | beta duplicates or obligate multimers › N-terminal domain of HCV E1 › N-terminal domain of HCV E1 › N-terminal domain of HCV E1 › HCV_env | 0.82 | 59.0 | 6.24e-01 | 74.0% | 92.2% |
| 3536857 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.51 | 37.0 | 2.94e-01 | 79.5% | 87.9% |
| 4948250 | 4.1.1.301 ↗ | beta barrels › SH3 › SH3 › SH3 › MJ1316 | 0.50 | 34.0 | 3.60e-01 | 91.8% | 78.5% |
D2
medium
residues 59-104_120-192