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envelope_protein_E1
Euk-VirGuereza_hepacivirus
envelope_protein_E1__YP_009684355__Guereza_hepacivirus__1354498
Identity
- Accession:
- YP_009684355 ↗
- Protein ID:
- envelope_protein_E1
- Kingdom:
- euk
Quality
65.6
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Hepacivirus›
Guereza_hepacivirus
TaxID: 1354498
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-77_120-138
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01539.23 best | HCV_env | 23.5 | 5.90e-05 | 93.9% | 18.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.65 | 50.0 | 4.54e-01 | 83.3% | 71.1% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 48.0 | 4.06e-01 | 84.8% | 64.7% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.61 | 49.0 | 4.42e-01 | 89.4% | 69.1% |
| 2hczX02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.60 | 49.0 | 4.23e-01 | 89.4% | 68.3% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 49.0 | 4.41e-01 | 93.9% | 77.8% |
| 3lqmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.80e-01 | 78.8% | 74.4% |
| 1wfjA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 39.0 | 3.22e-01 | 72.7% | 58.1% |
| 3mlpA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.51e-01 | 84.8% | 57.3% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 47.0 | 4.64e-01 | 95.5% | 95.8% |
| 2wllA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.55 | 40.0 | 3.21e-01 | 80.3% | 65.5% |
| 2qcuA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 37.0 | 2.95e-01 | 80.3% | 60.9% |
| 3wwjA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.52 | 40.0 | 3.07e-01 | 89.4% | 84.1% |
| 2dy1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 38.0 | 3.49e-01 | 84.8% | 84.5% |
| 2bm0A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 39.0 | 3.47e-01 | 86.4% | 81.6% |
| 1txoB00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 39.0 | 2.75e-01 | 86.4% | 81.4% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.50 | 40.0 | 3.05e-01 | 90.9% | 56.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3058711 | 6042.1.1.1 ↗ | beta duplicates or obligate multimers › N-terminal domain of HCV E1 › N-terminal domain of HCV E1 › N-terminal domain of HCV E1 › HCV_env | 0.85 | 57.0 | 5.82e-01 | 71.2% | 71.9% |
| 5043353 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 52.0 | 4.55e-01 | 80.3% | 81.1% |
| 5069009 | 11.1.1.124 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_B | 0.67 | 50.0 | 4.53e-01 | 80.3% | 74.4% |
| 4988710 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 50.0 | 4.50e-01 | 80.3% | 77.8% |
| 4242918 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.66 | 46.0 | 4.20e-01 | 74.2% | 74.4% |
| 4115170 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.66 | 49.0 | 4.35e-01 | 80.3% | 77.9% |
| 5044832 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 48.0 | 4.17e-01 | 80.3% | 79.0% |
| 4122119 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.64 | 45.0 | 4.03e-01 | 74.2% | 66.3% |
| 5027841 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 50.0 | 4.56e-01 | 87.9% | 87.8% |
| 5012922 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 46.0 | 4.16e-01 | 78.8% | 78.9% |
| 5056756 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 46.0 | 4.01e-01 | 78.8% | 62.0% |
| 4543255 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.62 | 44.0 | 3.78e-01 | 74.2% | 67.6% |
| 3791661 | 11.1.1.889 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26428 | 0.62 | 46.0 | 3.70e-01 | 81.8% | 66.4% |
| 3457999 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 49.0 | 4.11e-01 | 87.9% | 68.7% |
| 4954200 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 4.09e-01 | 78.8% | 82.4% |
| 4952569 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 4.12e-01 | 80.3% | 85.7% |
| 4954465 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 3.94e-01 | 80.3% | 76.8% |
| 4953532 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 3.96e-01 | 77.3% | 83.5% |
| 4954467 | 11.1.1.237 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 | 0.59 | 43.0 | 4.03e-01 | 80.3% | 83.5% |
| 3297687 | 11.1.1.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Expansin_C | 0.58 | 47.0 | 4.11e-01 | 90.9% | 63.8% |
| 5067673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 39.0 | 3.92e-01 | 80.3% | 72.3% |
| 3513821 | 355.1.1.11 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › TIG_plexin | 0.57 | 47.0 | 4.13e-01 | 92.4% | 88.0% |
| 3265947 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 3.97e-01 | 89.4% | 83.0% |
| 4945206 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 3.73e-01 | 83.3% | 86.0% |
| 4013759 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 3.44e-01 | 83.3% | 56.9% |
| 3266209 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.55 | 40.0 | 3.75e-01 | 80.3% | 78.8% |
| 5060624 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 41.0 | 4.01e-01 | 83.3% | 77.3% |
| 3988148 | 12.6.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_95_C | 0.54 | 41.0 | 3.64e-01 | 81.8% | 63.3% |
| 3255350 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.54 | 42.0 | 3.78e-01 | 87.9% | 69.0% |
| 3936013 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.01e-01 | 93.9% | 78.9% |
| 3795037 | 221.14.1.1 ↗ | a+b two layers › beta-Grasp › TAR DNA-binding protein 43 N-terminal domain › TAR DNA-binding protein 43 N-terminal domain › TDP43_N | 0.53 | 43.0 | 4.21e-01 | 92.4% | 92.0% |
| 4954979 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.80e-01 | 83.3% | 78.7% |
| 4308556 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.51 | 38.0 | 3.40e-01 | 81.8% | 84.0% |
| 4020715 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.51 | 38.0 | 3.34e-01 | 84.8% | 65.5% |
D2
medium
residues 78-119_139-209