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envelope_protein_E

Euk-Vir

Cacipacore_virus

envelope_protein_E__YP_009333107__Cacipacore_virus__64305

Identity

Accession:: YP_009333107 ↗
Protein ID:: envelope_protein_E
Kingdom:: euk

Quality

83.2 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Orthoflavivirus› Cacipacore_virus

TaxID: 64305

Cluster

View cluster (29 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-52_130-197_282-291

PDB

Domain cluster: rep: uncovered_polypeptide_truncated_polyprotein__YP_006485886_0-792__Murray_Valley_encephalitis_virus__11079__D299-336_439-487_569-589

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00869.26 best	Flavi_glycoprot	31.1	2.00e-07	71.3%	24.0%
PF00869.26	Flavi_glycoprot	56.5	3.80e-15	36.1%	14.0%

D2 high residues 59-128_207-259

PDB

Domain cluster: rep: envelope_protein_E__YP_009227198__Zika_virus__64320__D55-128_231-256

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00869.26 best	Flavi_glycoprot	84.4	1.20e-23	58.5%	22.7%
PF00869.26	Flavi_glycoprot	59.1	6.00e-16	45.5%	18.3%

D3 high residues 309-399

PDB

Domain cluster: rep: envelope_protein__YP_009163750__Spanish_goat_encephalitis_virus__1691889__D312-394

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02832.23 best	Flavi_glycop_C	100.9	5.00e-29	100.0%	91.8%

D4 high residues 403-499

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21659.3 best	Flavi_E_stem	139.8	4.20e-41	96.9%	99.0%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7zh0A01	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.69	51.0	3.32e-01	77.3%	77.0%
1y6xA00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.62	45.0	4.68e-01	76.3%	85.1%
4gc0A02	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.56	42.0	3.12e-01	76.3%	32.7%
2y8nA00	3.20.70.20	Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain ›	0.55	48.0	2.83e-01	100.0%	70.4%
5dqqA01	1.20.120.350	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C	0.53	40.0	3.66e-01	100.0%	60.2%
1txuA02	1.20.1050.80	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain	0.53	46.0	3.97e-01	100.0%	61.9%
1e1cA01	3.20.20.240	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase	0.52	38.0	2.42e-01	75.3%	78.0%
3h20A04	1.10.1240.50	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.52	37.0	3.82e-01	97.9%	80.9%
1r9dA01	3.20.70.20	Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain ›	0.51	44.0	2.68e-01	100.0%	50.2%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2721992	6072.1.1.1 ↗	alpha arrays › Transmembrane domain of envelope protein E › Transmembrane domain of envelope protein E › Transmembrane domain of envelope protein E › Flavi_E_stem	0.84	77.0	7.71e-01	100.0%	97.9%
2811987	138.1.1.37 ↗	alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › TVHS-like	0.65	33.0	3.43e-01	88.7%	51.1%
5015635	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.61	40.0	3.33e-01	76.3%	36.7%
4947815	6155.1.1.0 ↗	alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter	0.59	49.0	4.87e-01	99.0%	84.0%
3929151	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.55	45.0	3.14e-01	88.7%	62.2%
3894123	148.1.3.56 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Arv1	0.54	39.0	3.27e-01	79.4%	41.1%
3742626	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	38.0	2.36e-01	74.2%	16.8%
3188775	1015.1.1.1 ↗	alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › INSIG	0.53	41.0	3.44e-01	92.8%	45.1%