←Back to structures
envelope_protein
Euk-VirLouping_ill_virus
envelope_protein__NP_740271__Louping_ill_virus__11086
Identity
- Accession:
- NP_740271 ↗
- Protein ID:
- envelope_protein
- Kingdom:
- euk
Quality
83.3
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Orthoflavivirus›
Louping_ill_virus
TaxID: 11086
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-53_135-200_272-297
Domain cluster:
rep: uncovered_polypeptide_truncated_polyprotein__YP_006485886_0-792__Murray_Valley_encephalitis_virus__11079__D299-336_439-487_569-589
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00869.26 best | Flavi_glycoprot | 27.6 | 2.40e-06 | 61.9% | 22.7% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1svbA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.96 | 86.0 | 8.34e-01 | 100.0% | 84.6% |
| 6iw2A01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.92 | 80.0 | 7.85e-01 | 100.0% | 84.2% |
| 1ok8A01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.88 | 64.0 | 6.76e-01 | 100.0% | 81.7% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.74 | 69.0 | 6.31e-01 | 100.0% | 81.1% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.57 | 41.0 | 3.94e-01 | 73.8% | 95.8% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 3.71e-01 | 75.4% | 95.4% |
| 1wubA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.53 | 46.0 | 4.13e-01 | 95.2% | 79.5% |
| 1gwyA00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.53 | 48.0 | 4.32e-01 | 99.2% | 80.0% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 45.0 | 4.35e-01 | 95.2% | 89.2% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.53 | 31.0 | 2.90e-01 | 90.5% | 43.4% |
| 2gtlO02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 43.0 | 4.01e-01 | 96.8% | 69.9% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.52 | 33.0 | 3.54e-01 | 94.4% | 72.1% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 44.0 | 4.04e-01 | 94.4% | 81.4% |
| 6rtqA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.52 | 38.0 | 3.83e-01 | 94.4% | 74.4% |
| 1y0gA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.52 | 44.0 | 4.05e-01 | 95.2% | 80.5% |
| 7btxA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.51 | 35.0 | 2.66e-01 | 71.4% | 78.8% |
| 2gtlN02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 42.0 | 3.82e-01 | 96.8% | 68.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4861488 | 5090.1.1.1 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot | 0.95 | 92.0 | 6.66e-01 | 100.0% | 92.1% |
| 2330240 | 5090.1.1.1 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot | 0.91 | 87.0 | 6.30e-01 | 100.0% | 89.0% |
| 3629462 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.77 | 72.0 | 5.33e-01 | 100.0% | 89.3% |
| 3626193 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.77 | 72.0 | 4.97e-01 | 100.0% | 90.5% |
| 3938228 | 5090.1.1.8 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › EFF-AFF | 0.75 | 70.0 | 4.99e-01 | 100.0% | 87.0% |
| 3990413 | 2.1.1.141 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › WCOB | 0.60 | 31.0 | 4.05e-01 | 85.7% | 90.0% |
| 3972681 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 36.0 | 4.12e-01 | 75.4% | 87.2% |
| 3638210 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.56 | 42.0 | 3.58e-01 | 77.8% | 97.6% |
| 337170 | 2.19.1.1 ↗ | beta barrels › OB-fold › Putative membrane protein › Putative membrane protein › DUF3239 | 0.56 | 34.0 | 3.38e-01 | 99.2% | 57.4% |
| 3901027 | 11.2.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_CAPS | 0.55 | 40.0 | 4.03e-01 | 75.4% | 90.8% |
| 4011172 | 331.3.1.46 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF7053 | 0.54 | 38.0 | 3.41e-01 | 72.2% | 76.8% |
| 4030650 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.54 | 46.0 | 4.43e-01 | 95.2% | 86.0% |
| 1674783 | 243.1.1.15 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › T4BSS_DotI_IcmL | 0.53 | 38.0 | 3.69e-01 | 73.0% | 94.2% |
| 3875760 | 11.2.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_CAPS | 0.53 | 39.0 | 2.79e-01 | 75.4% | 30.8% |
| 860 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.52 | 43.0 | 4.39e-01 | 96.8% | 93.4% |
| 3723387 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 44.0 | 3.87e-01 | 99.2% | 62.7% |
| 5012406 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 36.0 | 3.84e-01 | 73.8% | 92.9% |
| 3215260 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.51 | 46.0 | 4.48e-01 | 100.0% | 93.6% |
| 3782746 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 34.0 | 3.68e-01 | 81.7% | 78.2% |
| 3272801 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.51 | 42.0 | 3.02e-01 | 89.7% | 53.3% |
| 3195743 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 43.0 | 3.61e-01 | 95.2% | 79.1% |
D2
high
residues 55-128_217-265
Domain cluster:
rep: envelope_protein_E__YP_009227198__Zika_virus__64320__D55-128_231-256
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00869.26 best | Flavi_glycoprot | 85.5 | 5.70e-24 | 60.2% | 22.7% |
| PF00869.26 | Flavi_glycoprot | 34.8 | 1.50e-08 | 42.3% | 17.3% |
D3
high
residues 312-394
Domain cluster:
rep: envelope_protein__YP_009163750__Spanish_goat_encephalitis_virus__1691889__D312-394
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02832.23 best | Flavi_glycop_C | 42.4 | 8.60e-11 | 100.0% | 88.7% |
D4
medium
residues 402-492