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fiber-1
Euk-VirSimian_adenovirus_16
fiber-1__YP_009174168__Simian_adenovirus_16__1715778
Identity
- Accession:
- YP_009174168 ↗
- Protein ID:
- fiber-1
- Kingdom:
- euk
Quality
82.2
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Simian_adenovirus_16
TaxID: 1715778
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 391-548
Domain cluster:
rep: fiber__YP_009328924__Simian_mastadenovirus_WIV19__1923976__D315-484
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00541.25 best | Adeno_knob | 150.9 | 4.50e-44 | 100.0% | 93.0% |
D2
medium
residues 326-369
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v1hB00 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.82 | 72.0 | 5.50e-01 | 100.0% | 47.5% |
| 3s6xA01 | 6.20.10.20 | Special › Other non-globular › Laminin › | 0.78 | 66.0 | 5.68e-01 | 100.0% | 60.9% |
| 3s6xC03 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.66 | 47.0 | 4.82e-01 | 81.8% | 87.5% |
| 4a2lF02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 43.0 | 2.74e-01 | 93.2% | 39.2% |
| 3v64C01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.56 | 35.0 | 3.77e-01 | 75.0% | 87.1% |
| 3r5tA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.50 | 34.0 | 2.69e-01 | 72.7% | 94.7% |