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fiber-2
Euk-VirHuman_mastadenovirus_F
fiber-2__NP_040876__Human_mastadenovirus_F__130309
Identity
- Accession:
- NP_040876 ↗
- Protein ID:
- fiber-2
- Kingdom:
- euk
Quality
83.1
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Human_mastadenovirus_F
TaxID: 130309
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 371-544
Domain cluster:
rep: fiber__YP_009328924__Simian_mastadenovirus_WIV19__1923976__D315-484
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00541.25 best | Adeno_knob | 177.0 | 4.40e-52 | 100.0% | 93.5% |
D2
medium
residues 314-365
Domain cluster:
rep: fiber__YP_002213796__Human_mastadenovirus_B__108098__D74-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00608.23 best | Adeno_shaft | 31.7 | 1.30e-07 | 65.4% | 61.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v1hB00 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.75 | 66.0 | 5.29e-01 | 100.0% | 56.4% |
| 3s6xA01 | 6.20.10.20 | Special › Other non-globular › Laminin › | 0.72 | 54.0 | 5.07e-01 | 90.4% | 65.2% |
| 3s6xC03 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.60 | 42.0 | 4.54e-01 | 94.2% | 95.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2327461 | 53.1.1.0 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral | 0.82 | 69.0 | 6.23e-01 | 94.2% | 69.4% |
| 1663272 | 53.1.1.1 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral › Adeno_shaft | 0.75 | 65.0 | 5.83e-01 | 100.0% | 76.0% |
| 2321116 | 53.1.1.0 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral | 0.70 | 58.0 | 5.18e-01 | 100.0% | 64.9% |
| 3792192 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.56 | 41.0 | 3.76e-01 | 82.7% | 98.7% |
| 3817032 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.52 | 35.0 | 3.57e-01 | 73.1% | 100.0% |
| 3538253 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.52 | 38.0 | 4.01e-01 | 92.3% | 88.9% |
| 3546394 | 389.1.1.98 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA, cEGF | 0.51 | 37.0 | 3.31e-01 | 84.6% | 89.4% |
| 3748090 | 389.1.1.17 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition | 0.50 | 34.0 | 3.59e-01 | 73.1% | 95.6% |
| 3542803 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.50 | 38.0 | 3.88e-01 | 90.4% | 88.0% |