←Back to structures
fiber-2
Euk-VirSimian_adenovirus_19
fiber-2__YP_009174211__Simian_adenovirus_19__38416
Identity
- Accession:
- YP_009174211 ↗
- Protein ID:
- fiber-2
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Simian_adenovirus_19
TaxID: 38416
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 355-527
Domain cluster:
rep: fiber__YP_009328924__Simian_mastadenovirus_WIV19__1923976__D315-484
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00541.25 best | Adeno_knob | 180.4 | 4.20e-53 | 100.0% | 93.0% |
D2
medium
residues 87-112
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.61 | 40.0 | 2.26e-01 | 100.0% | 4.8% |
| 3k9xC02 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.60 | 40.0 | 3.90e-01 | 100.0% | 61.4% |
| 5weeB00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.58 | 40.0 | 2.45e-01 | 73.1% | 11.8% |
| 1ijqA02 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.53 | 36.0 | 3.21e-01 | 84.6% | 92.6% |