←Back to structures
fiber_2
Euk-VirSimian_adenovirus_49
fiber_2__YP_004300224__Simian_adenovirus_49__995022
Identity
- Accession:
- YP_004300224 ↗
- Protein ID:
- fiber_2
- Kingdom:
- euk
Quality
86.1
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Simian_adenovirus_49
TaxID: 995022
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 241-415
Domain cluster:
rep: fiber__YP_009328924__Simian_mastadenovirus_WIV19__1923976__D315-484
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00541.25 best | Adeno_knob | 198.8 | 9.20e-59 | 100.0% | 93.0% |
D2
medium
residues 67-118
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v1hB00 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.79 | 68.0 | 5.45e-01 | 96.2% | 56.4% |
| 3s6xA01 | 6.20.10.20 | Special › Other non-globular › Laminin › | 0.75 | 65.0 | 5.99e-01 | 100.0% | 76.8% |
| 3s6xC03 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.62 | 44.0 | 4.83e-01 | 88.5% | 100.0% |
| 3f1sB01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.53 | 36.0 | 3.68e-01 | 71.2% | 86.3% |
| 3k9xC02 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.52 | 38.0 | 4.02e-01 | 84.6% | 95.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2327461 | 53.1.1.0 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral | 0.86 | 78.0 | 6.94e-01 | 100.0% | 76.4% |
| 2321116 | 53.1.1.0 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral | 0.75 | 65.0 | 5.75e-01 | 100.0% | 68.8% |
| 3748090 | 389.1.1.17 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition | 0.59 | 40.0 | 4.17e-01 | 71.2% | 97.8% |
| 3219157 | 389.1.1.2 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Laminin_EGF | 0.59 | 45.0 | 4.44e-01 | 100.0% | 81.8% |
| 3875314 | 389.1.1.17 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition | 0.56 | 41.0 | 4.13e-01 | 84.6% | 98.2% |
| 4473013 | 389.1.1.28 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › cEGF | 0.55 | 42.0 | 4.41e-01 | 86.5% | 100.0% |
| 4353800 | 389.1.1.17 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition | 0.53 | 36.0 | 3.56e-01 | 78.8% | 67.3% |
| 4434864 | 389.1.1.28 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › cEGF | 0.52 | 38.0 | 3.99e-01 | 88.5% | 93.3% |
| 3840758 | 389.1.1.17 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition | 0.52 | 37.0 | 3.86e-01 | 78.8% | 100.0% |
| 3576057 | 387.1.3.9 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like › EB | 0.52 | 35.0 | 3.49e-01 | 73.1% | 98.2% |
| 3542803 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.51 | 35.0 | 3.61e-01 | 75.0% | 98.0% |