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fiber_2

Euk-Vir

Lizard_adenovirus_2

fiber_2__YP_009051671__Lizard_adenovirus_2__874272

Identity

Accession:
YP_009051671 ↗
Protein ID:
fiber_2
Kingdom:
euk

Quality

65.5 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Barthadenovirus› Lizard_adenovirus_2

TaxID: 874272

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-92
PDB
Domain cluster: rep: fiber__YP_009246439__Bat_mastadenovirus_WIV11__1788433__D45-98
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v1hB00 2.10.25.20 Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 0.58 48.0 4.12e-01 95.0% 73.3%
3s6xA01 6.20.10.20 Special › Other non-globular › Laminin › 0.55 44.0 4.31e-01 95.0% 92.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2327461 53.1.1.0 ↗ beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral 0.60 49.0 4.71e-01 95.0% 93.1%
2321116 53.1.1.0 ↗ beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral 0.54 45.0 4.24e-01 98.3% 85.7%
4659288 389.6.1.5 ↗ few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain › Furin-like_2 0.50 41.0 2.32e-01 100.0% 14.0%
D2 medium residues 202-305
PDB
Domain cluster: rep: fiber-2__YP_009174169__Simian_adenovirus_16__1715778__D66-185
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s6xA01 6.20.10.20 Special › Other non-globular › Laminin › 0.65 42.0 4.88e-01 74.0% 97.1%
1v1hB00 2.10.25.20 Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 0.62 47.0 4.78e-01 85.6% 83.2%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2327461 53.1.1.0 ↗ beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral 0.70 45.0 5.27e-01 70.2% 94.4%
2321116 53.1.1.0 ↗ beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral 0.63 44.0 4.95e-01 81.7% 97.4%
1833577 53.1.1.3 ↗ beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral › Reo_sigmaC_M 0.56 38.0 4.30e-01 89.4% 96.1%
213988 53.1.1.0 ↗ beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral 0.56 37.0 4.30e-01 83.7% 97.3%
3883215 389.6.1.4 ↗ few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain › GF_recep_IV 0.51 40.0 2.69e-01 87.5% 29.9%
D3 medium residues 311-382_394-433
PDB