fiber

Euk-Vir

Human_mastadenovirus_A

fiber__NP_040933__Human_mastadenovirus_A__129875

Identity

82.5 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Human_mastadenovirus_A

TaxID: 129875

View cluster (14 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 337-391

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00608.23 best	Adeno_shaft	33.6	3.50e-08	74.6%	68.2%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3s6xA01	6.20.10.20	Special › Other non-globular › Laminin ›	0.65	54.0	5.03e-01	98.2%	73.9%
4gu4A01	2.10.25.20	Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1	0.62	43.0	4.74e-01	92.7%	95.3%
1d8jA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	32.0	2.89e-01	70.9%	42.0%
1agxA01	3.40.50.1170	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › L-asparaginase, N-terminal domain	0.50	35.0	2.45e-01	76.4%	59.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2321116	53.1.1.0 ↗	beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral	0.65	52.0	4.72e-01	90.9%	64.9%
3276883	389.1.1.7 ↗	few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA	0.52	39.0	3.74e-01	83.6%	96.9%
2625949	389.1.1.10 ↗	few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2,EGF_3	0.51	38.0	3.72e-01	85.5%	90.3%

D2 high residues 409-584

PDB

Domain cluster: rep: fiber__YP_009328924__Simian_mastadenovirus_WIV19__1923976__D315-484

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00541.25 best	Adeno_knob	216.2	4.20e-64	100.0%	93.0%