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fiber
Euk-VirDuck_adenovirus_2
fiber__YP_009047170__Duck_adenovirus_2__1520006
Identity
- Accession:
- YP_009047170 ↗
- Protein ID:
- fiber
- Kingdom:
- euk
Quality
63.5
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Aviadenovirus›
Duck_adenovirus_2
TaxID: 1520006
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 331-391
Domain cluster:
rep: fiber__YP_001974434__Human_mastadenovirus_D__130310__D45-94
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v1hB00 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.74 | 65.0 | 5.52e-01 | 100.0% | 70.3% |
| 4gu4A01 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.65 | 41.0 | 4.69e-01 | 75.4% | 90.7% |
| 3s6xA01 | 6.20.10.20 | Special › Other non-globular › Laminin › | 0.62 | 52.0 | 5.07e-01 | 100.0% | 91.3% |
| 1z1yA01 | 2.90.20.10 | Mainly Beta › Orthogonal Prism › Plasmodium vivax P25 fold › Plasmodium vivax P25 domain | 0.55 | 45.0 | 3.40e-01 | 96.7% | 52.9% |
| 4rsuE01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.53 | 35.0 | 3.63e-01 | 70.5% | 72.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2327461 | 53.1.1.0 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral | 0.73 | 64.0 | 6.08e-01 | 100.0% | 90.3% |
| 1080995 | 53.1.1.3 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral › Reo_sigmaC_M | 0.71 | 45.0 | 5.13e-01 | 98.4% | 88.9% |
| 2321116 | 53.1.1.0 ↗ | beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral | 0.64 | 53.0 | 5.06e-01 | 100.0% | 81.8% |
| 4857570 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.54 | 30.0 | 2.80e-01 | 85.2% | 39.0% |
| 3276883 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.51 | 35.0 | 3.45e-01 | 72.1% | 96.9% |
| 3539552 | 389.6.1.5 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain › Furin-like_2 | 0.50 | 42.0 | 3.00e-01 | 100.0% | 44.2% |
D2
medium
residues 625-698