fibre

Euk-Vir

Skunk_adenovirus_PB1

fibre__YP_009162606__Skunk_adenovirus_PB1__1641642

Identity

76.8 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Skunk_adenovirus_PB1

TaxID: 1641642

View cluster (5 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 426-603

PDB

Domain cluster: rep: fiber__YP_009328924__Simian_mastadenovirus_WIV19__1923976__D315-484

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00541.25 best	Adeno_knob	147.1	6.90e-43	100.0%	93.0%

D2 medium residues 24-87

PDB

D3 medium residues 356-419

PDB

Domain cluster: rep: fiber__YP_002213796__Human_mastadenovirus_B__108098__D74-130

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00608.23 best	Adeno_shaft	27.6	2.60e-06	64.1%	84.1%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1v1hB00	2.10.25.20	Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1	0.76	64.0	5.54e-01	95.3%	71.3%
3s6xA01	6.20.10.20	Special › Other non-globular › Laminin ›	0.64	53.0	5.25e-01	95.3%	92.8%
1z1yA01	2.90.20.10	Mainly Beta › Orthogonal Prism › Plasmodium vivax P25 fold › Plasmodium vivax P25 domain	0.56	44.0	3.41e-01	92.2%	54.1%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2327461	53.1.1.0 ↗	beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral	0.73	61.0	5.97e-01	95.3%	93.1%
2321116	53.1.1.0 ↗	beta duplicates or obligate multimers › Triple beta-spiral › Triple beta-spiral › Triple beta-spiral	0.66	56.0	5.32e-01	95.3%	84.4%