←Back to structures

fusion_protein

Euk-Vir

Blueberry_latent_virus

fusion_protein__YP_003934623__Blueberry_latent_virus__430710

Identity

Accession:: YP_003934623 ↗
Protein ID:: fusion_protein
Kingdom:: euk

Quality

77.5 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Amalgaviridae› Amalgavirus› Blueberry_latent_virus

TaxID: 430710

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-121

PDB

Domain cluster: rep: putative_fusion_protein__YP_003868436__Rhododendron_virus_A__878260__D37-144

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2w45A01	1.20.120.860	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Herpesvirus alkaline exonuclease, N-terminal domain	0.56	44.0	4.35e-01	88.9%	80.2%
3fhdA01	1.20.120.860	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Herpesvirus alkaline exonuclease, N-terminal domain	0.55	44.0	4.16e-01	88.9%	70.6%
3nz4B03	1.10.274.20	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3	0.53	32.0	3.32e-01	70.4%	63.5%
2q0tB01	1.20.1290.10	Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like	0.51	43.0	3.37e-01	93.5%	85.8%
7utzR02	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.50	36.0	2.74e-01	73.1%	57.5%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3495555	5079.1.1.0 ↗	alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain	0.53	37.0	3.03e-01	73.1%	97.6%
3826289	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.52	40.0	4.01e-01	90.7%	80.9%
3998378	5001.1.1.41 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw	0.51	47.0	3.27e-01	100.0%	94.3%
3290460	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.50	39.0	3.33e-01	85.2%	53.7%
3539619	7015.1.1.1 ↗	alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC	0.50	34.0	3.16e-01	71.3%	60.7%

D2 high residues 281-330

PDB

Domain cluster: representative

CATH (16)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4mtnA01	3.30.1480.10	Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain	0.60	47.0	3.96e-01	92.0%	54.7%
1xexB00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.59	41.0	2.95e-01	100.0%	23.0%
1fxkB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.58	43.0	3.36e-01	94.0%	36.7%
2qsrA01	3.90.1150.50	Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain	0.58	42.0	3.09e-01	100.0%	26.5%
1inpA02	3.30.540.10	Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1	0.57	45.0	3.24e-01	100.0%	55.1%
1zcdA00	1.20.1530.10	Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain	0.57	41.0	2.52e-01	82.0%	65.4%
3knvA00	3.30.40.10	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger)	0.56	44.0	3.35e-01	88.0%	87.0%
2zdiB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.55	41.0	3.26e-01	94.0%	37.7%
3aeiA00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.55	37.0	3.15e-01	94.0%	38.3%
1vw4H00	3.90.1180.10	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13	0.54	40.0	2.98e-01	84.0%	70.3%
2xzmG00	1.10.455.10	Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5	0.53	39.0	2.73e-01	84.0%	33.9%
4djbA00	3.30.70.2870	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3	0.53	42.0	3.36e-01	98.0%	55.1%
3llcA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.53	37.0	2.37e-01	80.0%	14.6%
2i7gB00	3.20.20.30	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain	0.52	43.0	2.67e-01	100.0%	14.8%
5w5yB08	3.90.1800.10	Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain	0.50	34.0	2.53e-01	72.0%	72.2%
1vq0A02	3.90.1280.10	Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like	0.50	41.0	4.00e-01	100.0%	84.2%

ECOD (32)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3664364	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.77	51.0	4.79e-01	100.0%	56.7%
3701805	4203.1.1.0 ↗	few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like	0.59	48.0	4.84e-01	100.0%	92.0%
3637394	2484.1.1.2 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin	0.59	51.0	3.20e-01	98.0%	18.9%
3642597	109.4.1.498 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487	0.59	48.0	2.80e-01	100.0%	9.4%
4599933	633.23.1.0 ↗	alpha bundles › Bromodomain-like › Claudin › Claudin	0.59	43.0	3.35e-01	82.0%	35.0%
60305	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.58	43.0	3.38e-01	94.0%	37.7%
4141047	593.1.1.0 ↗	alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like	0.57	46.0	3.05e-01	100.0%	58.5%
4381440	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.57	42.0	3.24e-01	94.0%	34.8%
3489929	2490.2.1.1 ↗	a/b three-layered sandwiches › Ribosomal protein L13/L15p/L18e/L32e › Ribosomal protein L13 and L16-A › Ribosomal protein L13 and L16-A › Ribosomal_L13	0.56	44.0	3.20e-01	88.0%	51.6%
3174487	2498.5.1.0 ↗	mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like	0.56	45.0	2.83e-01	100.0%	69.6%
4666900	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.56	42.0	3.14e-01	94.0%	32.0%
3637098	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.56	41.0	3.06e-01	94.0%	30.1%
3239600	327.11.1.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II)	0.56	36.0	3.22e-01	74.0%	47.1%
4112182	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.56	41.0	3.14e-01	94.0%	33.9%
4181293	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.55	41.0	3.17e-01	94.0%	36.4%
5029669	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.55	40.0	3.04e-01	94.0%	32.5%
3775162	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	47.0	3.38e-01	100.0%	46.5%
3202986	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.55	40.0	3.03e-01	94.0%	32.0%
3690513	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.55	40.0	2.97e-01	94.0%	30.1%
3739541	109.4.1.353 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MOR2-PAG1_N	0.54	44.0	2.99e-01	98.0%	24.7%
3485296	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.54	39.0	3.09e-01	92.0%	37.1%
3265214	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.53	39.0	3.02e-01	94.0%	34.8%
3901459	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	43.0	2.44e-01	100.0%	13.9%
3394225	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.53	38.0	3.01e-01	94.0%	34.8%
4016050	2490.2.1.1 ↗	a/b three-layered sandwiches › Ribosomal protein L13/L15p/L18e/L32e › Ribosomal protein L13 and L16-A › Ribosomal protein L13 and L16-A › Ribosomal_L13	0.52	41.0	2.86e-01	88.0%	52.2%
4224821	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.52	38.0	2.99e-01	94.0%	34.8%
4009409	109.4.1.2353 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HemY_N, TPR_2	0.51	40.0	2.40e-01	100.0%	11.3%
4234747	4203.1.1.1 ↗	few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33	0.51	42.0	4.08e-01	100.0%	84.5%
4096474	4203.1.1.1 ↗	few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33	0.51	41.0	4.18e-01	100.0%	98.0%
4618205	604.1.1.150 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954	0.51	41.0	3.25e-01	100.0%	85.8%
4065083	4203.1.1.1 ↗	few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33	0.51	42.0	4.17e-01	100.0%	89.1%
3311737	261.1.1.1 ↗	a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT	0.50	39.0	2.59e-01	100.0%	31.9%

D3 high residues 822-995

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2q24A00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.60	42.0	4.23e-01	98.9%	70.5%
3vprA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.55	39.0	4.28e-01	97.7%	88.3%
1yhlA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.54	38.0	3.04e-01	73.0%	79.8%
1t33A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.53	43.0	4.55e-01	97.7%	94.3%
6humG01	1.20.120.1200	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ	0.52	32.0	3.40e-01	92.0%	66.3%

D4 medium residues 128-265

PDB

Domain cluster: representative

CATH (41)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2x2vA00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.82	41.0	5.77e-01	88.4%	98.5%
6ynwH01	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.81	40.0	5.46e-01	92.0%	90.5%
5dn6J00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.80	41.0	5.63e-01	87.7%	94.6%
4kb2A01	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.79	40.0	4.50e-01	92.0%	62.4%
2xokP00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.77	40.0	5.33e-01	87.7%	93.2%
4h63H01	1.20.58.1710	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.76	39.0	5.32e-01	86.2%	95.8%
1ku9A02	1.10.287.450	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.74	35.0	5.17e-01	84.1%	100.0%
2wgmA01	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.74	39.0	4.91e-01	88.4%	85.4%
1qsdA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.72	38.0	4.33e-01	85.5%	68.6%
1gvnA00	1.10.8.130	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.70	38.0	4.72e-01	98.6%	83.9%
2d1lA00	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.70	39.0	3.17e-01	87.7%	30.9%
4ke2A00	6.10.140.1860	Special › Helix non-globular › Helix Hairpins ›	0.67	39.0	3.42e-01	90.6%	40.3%
1cqxA01	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.67	30.0	2.91e-01	87.0%	37.3%
2ic6A00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	35.0	4.72e-01	83.3%	100.0%
2b5uA02	1.10.287.620	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins	0.65	37.0	3.49e-01	84.8%	47.2%
3l8rA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.65	36.0	4.18e-01	81.9%	74.5%
3zciA00	1.20.58.1660	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.63	37.0	3.28e-01	87.7%	40.8%
3favD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.63	34.0	4.34e-01	89.9%	92.3%
1wa8A00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.62	35.0	4.12e-01	87.0%	78.8%
6wk3A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.61	28.0	2.83e-01	87.7%	40.0%
2uuiA00	1.20.120.550	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain	0.59	38.0	3.72e-01	97.1%	57.4%
3gi7A00	1.20.1270.180	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.59	38.0	4.26e-01	99.3%	85.4%
4egwA02	1.20.58.340	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region	0.57	37.0	3.96e-01	82.6%	74.8%
1s35A01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.56	31.0	3.50e-01	84.8%	69.3%
8ek4A01	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.56	41.0	4.19e-01	87.0%	77.4%
4cqiA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.56	32.0	3.60e-01	84.1%	72.0%
6v9zA02	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.56	40.0	3.11e-01	74.6%	36.6%
3ns4A00	1.10.357.110	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus	0.55	37.0	3.19e-01	89.1%	45.4%
3vkgA12	1.10.287.2610	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.55	38.0	3.24e-01	85.5%	45.1%
3h3mA00	1.20.58.380	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit.	0.54	28.0	3.33e-01	70.3%	73.0%
2gd5A00	6.10.140.1230	Special › Helix non-globular › Helix Hairpins ›	0.54	43.0	4.26e-01	97.8%	81.0%
3k66A01	1.20.120.770	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain	0.54	38.0	3.30e-01	73.2%	96.2%
8ipqB01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.53	37.0	2.96e-01	72.5%	39.0%
7sgrA02	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.53	39.0	3.05e-01	77.5%	40.0%
6ygiB01	1.10.4090.10	Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus	0.52	38.0	3.82e-01	76.1%	73.3%
3zdqA01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.52	38.0	2.90e-01	74.6%	36.6%
2d2sA02	1.20.58.1220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain	0.52	35.0	4.11e-01	87.0%	94.1%
3pwfA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.51	35.0	3.66e-01	70.3%	96.2%
3s84A02	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.51	43.0	4.15e-01	100.0%	79.0%
2yfaA02	1.20.1440.210	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.51	38.0	4.16e-01	95.7%	94.0%
2cmrA00	1.20.58.1860	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	40.0	3.54e-01	81.9%	84.9%

ECOD (43)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2674763	5041.1.1.1 ↗	extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C	0.79	40.0	5.31e-01	92.0%	89.3%
4991391	5058.1.1.0 ↗	alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region	0.77	38.0	4.44e-01	92.8%	66.0%
5055977	5058.1.1.0 ↗	alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region	0.75	40.0	4.74e-01	93.5%	73.0%
5060250	632.11.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like	0.75	33.0	3.48e-01	97.1%	45.4%
4474640	604.1.1.150 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954	0.71	41.0	4.31e-01	92.8%	63.2%
3386700	304.58.1.0 ↗	a+b two layers › Alpha-beta plaits › FepE-like › FepE-like	0.70	39.0	2.97e-01	84.1%	25.4%
5077440	1075.1.2.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX	0.69	37.0	3.69e-01	97.8%	50.0%
3530378	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.68	38.0	3.63e-01	87.0%	47.1%
3256881	3567.1.1.0 ↗	a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer	0.68	39.0	3.83e-01	92.8%	53.1%
3212879	174.1.1.40 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF5373	0.66	35.0	3.45e-01	84.8%	47.6%
5024408	3755.3.1.637 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121	0.65	39.0	3.47e-01	85.5%	44.3%
3389713	174.1.1.29 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728	0.64	36.0	3.59e-01	84.8%	52.9%
3927038	3755.4.1.0 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain	0.64	36.0	3.55e-01	86.2%	51.7%
3887920	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.64	35.0	3.41e-01	86.2%	47.1%
4057455	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.63	32.0	2.43e-01	88.4%	21.0%
2758046	3684.1.1.0 ↗	alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like	0.63	39.0	4.04e-01	96.4%	65.9%
5047072	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.63	37.0	3.54e-01	84.8%	50.6%
4988997	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.62	37.0	3.39e-01	84.1%	45.6%
4860885	633.6.1.6 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACAD9-ACADV_C	0.62	36.0	4.05e-01	90.6%	73.3%
3835699	611.9.1.4 ↗	alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N	0.61	34.0	3.37e-01	87.7%	49.3%
4473674	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.60	42.0	4.72e-01	97.1%	90.0%
3504228	174.1.1.25 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Mtp	0.58	32.0	3.42e-01	84.1%	59.2%
3644241	310.2.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF	0.58	40.0	4.21e-01	85.5%	77.6%
3938459	5076.2.1.1 ↗	alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › EI24	0.57	45.0	3.67e-01	83.3%	76.5%
3549709	109.4.1.2111 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G, MIF4G_like_2	0.57	42.0	2.80e-01	76.8%	26.2%
3217114	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.55	40.0	3.93e-01	100.0%	69.1%
4955963	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.55	38.0	3.35e-01	85.5%	49.0%
3247044	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.55	40.0	4.06e-01	100.0%	76.3%
3623410	2004.1.1.198 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23	0.55	45.0	3.03e-01	87.7%	83.0%
4943286	633.10.1.0 ↗	alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like	0.55	40.0	3.98e-01	76.1%	88.5%
3408532	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.54	37.0	3.48e-01	85.5%	57.1%
4388471	1075.4.1.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold	0.54	42.0	3.23e-01	81.2%	94.3%
4082395	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.54	33.0	3.02e-01	86.2%	45.6%
4593595	3835.1.1.0 ↗	alpha bundles › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein	0.53	40.0	3.39e-01	92.8%	49.1%
3450026	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.53	42.0	3.94e-01	99.3%	69.9%
5075066	633.21.1.0 ↗	alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107	0.53	38.0	4.19e-01	97.8%	93.6%
3702176	603.1.1.100 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27017	0.52	37.0	3.76e-01	83.3%	72.1%
3718312	604.1.1.118 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › GOSR1_N	0.52	37.0	3.70e-01	83.3%	69.7%
4026054	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.52	39.0	3.80e-01	79.7%	72.2%
3739903	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.52	36.0	3.44e-01	71.0%	96.9%
3175134	601.20.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Apolipophorin-III › Apolipophorin-III	0.51	45.0	4.14e-01	96.4%	88.3%
3406232	174.1.1.1 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin	0.51	40.0	4.04e-01	93.5%	82.7%
3611298	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.50	38.0	3.90e-01	96.4%	82.7%

D5 medium residues 338-371_404-429_518-548

PDB

Domain cluster: representative

D6 medium residues 430-517_549-599_611-672

PDB

Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200