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fusion_protein
Euk-VirPeridroma_alphabaculovirus
fusion_protein__YP_009049834__Peridroma_alphabaculovirus__1346829
Identity
- Accession:
- YP_009049834 ↗
- Protein ID:
- fusion_protein
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
TaxID: 1346829
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-49_313-412
Domain cluster:
rep: envelope_fusion_protein__YP_009345747__Mythimna_unipuncta_granulovirus_B__2169746__D27-50_306-403_477-502
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 148.9 | 3.10e-43 | 83.3% | 16.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ztmA01 | 2.40.490.10 | Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain | 0.71 | 58.0 | 6.12e-01 | 98.3% | 98.1% |
| 4twlA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.50 | 43.0 | 3.47e-01 | 94.2% | 95.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3407194 | 5093.1.1.2 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Baculo_F | 0.84 | 77.0 | 5.15e-01 | 95.8% | 78.7% |
| 2868232 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.66 | 59.0 | 4.00e-01 | 98.3% | 76.6% |
| 4874199 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.65 | 59.0 | 3.95e-01 | 99.2% | 74.4% |
| 2722705 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.65 | 58.0 | 3.92e-01 | 98.3% | 73.7% |
| 3444970 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.53 | 32.0 | 3.16e-01 | 79.2% | 55.4% |
D2
medium
residues 50-60_253-312
Domain cluster:
rep: envelope_fusion_protein__YP_009552688__Operophtera_brumata_nucleopolyhedrovirus__1046267__D277-336
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 76.4 | 2.70e-21 | 90.1% | 10.2% |
D3
medium
residues 61-139_181-252
Domain cluster:
rep: F_protein__YP_009165735__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D49-139_173-272
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 38.4 | 8.70e-10 | 53.6% | 12.8% |
| PF12259.14 | Baculo_F | 64.6 | 1.00e-17 | 51.0% | 12.2% |