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fusion_protein
Euk-VirAvian_paraavulavirus_3
fusion_protein__YP_009094215__Avian_paraavulavirus_3__2560327
Identity
- Accession:
- YP_009094215 ↗
- Protein ID:
- fusion_protein
- Kingdom:
- euk
Quality
70.1
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Paraavulavirus›
Paraavulavirus_wisconsinense
TaxID: 2560327
Cluster
View cluster (59 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-48_279-286_288-356
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00523.24 best | Fusion_gly | 36.0 | 3.70e-09 | 68.3% | 12.1% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b9bA01 | 2.40.490.10 | Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain | 0.92 | 83.0 | 8.01e-01 | 99.0% | 85.1% |
| 1g5gA01 | 2.40.490.10 | Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain | 0.91 | 87.0 | 8.54e-01 | 100.0% | 94.5% |
| 1ztmA01 | 2.40.490.10 | Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain | 0.89 | 79.0 | 7.86e-01 | 99.0% | 89.8% |
| 1g3pA01 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.63 | 33.0 | 3.54e-01 | 75.0% | 58.0% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.52 | 40.0 | 4.15e-01 | 100.0% | 86.9% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 40.0 | 2.83e-01 | 83.7% | 47.7% |
| 3bcyA00 | 3.40.1000.40 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 | 0.51 | 31.0 | 2.87e-01 | 100.0% | 43.8% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 26.0 | 2.88e-01 | 92.3% | 57.3% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.50 | 29.0 | 3.21e-01 | 76.9% | 72.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4873341 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.92 | 88.0 | 5.96e-01 | 100.0% | 96.9% |
| 1738158 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.91 | 87.0 | 5.81e-01 | 100.0% | 98.5% |
| 1175806 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.91 | 69.0 | 4.80e-01 | 78.8% | 35.3% |
| 4871079 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.89 | 83.0 | 5.77e-01 | 99.0% | 96.7% |
| 1737404 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.89 | 83.0 | 5.60e-01 | 99.0% | 96.4% |
| 4881664 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.88 | 67.0 | 4.78e-01 | 78.8% | 38.0% |
| 4872787 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.85 | 65.0 | 4.68e-01 | 78.8% | 39.5% |
| 4884487 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.84 | 63.0 | 4.23e-01 | 77.9% | 29.9% |
| 4871594 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.81 | 61.0 | 4.17e-01 | 78.8% | 30.7% |
| 5040273 | 4.6.1.4 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › DUF5749 | 0.64 | 44.0 | 5.08e-01 | 83.7% | 98.7% |
| 3237142 | 5093.1.1.0 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | 0.61 | 52.0 | 3.66e-01 | 93.3% | 80.0% |
| 3603136 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 29.0 | 3.52e-01 | 75.0% | 72.3% |
| 3968646 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.58 | 36.0 | 3.35e-01 | 84.6% | 48.5% |
| 3608102 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 33.0 | 3.82e-01 | 99.0% | 95.7% |
| 3797028 | 213.1.1.14 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_16 | 0.51 | 38.0 | 3.27e-01 | 80.8% | 89.2% |
| 3714701 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 29.0 | 3.22e-01 | 89.4% | 70.0% |
| 3718290 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 27.0 | 2.99e-01 | 77.9% | 63.7% |
D2
medium
residues 49-92_120-146_164-211
Domain cluster:
rep: fusion__NP_047111__Hendra_henipavirus__63330__D69-104_123-148_178-225
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00523.24 best | Fusion_gly | 37.2 | 1.60e-09 | 64.7% | 18.7% |
D3
medium
residues 147-163_212-278
Domain cluster:
rep: fusion_protein__YP_009513197__Avian_orthoavulavirus_1__2560319__D229-292
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ztmA02 | 1.10.287.2480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 56.0 | 4.23e-01 | 85.7% | 97.0% |
| 1g5gA02 | 1.10.287.2480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 52.0 | 4.12e-01 | 82.1% | 98.2% |
| 2k4yA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.59 | 36.0 | 3.57e-01 | 75.0% | 58.1% |
| 2k5iA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.53 | 33.0 | 3.34e-01 | 77.4% | 60.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4872787 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.75 | 68.0 | 4.75e-01 | 100.0% | 51.3% |
| 4881664 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.72 | 54.0 | 3.72e-01 | 79.8% | 24.4% |
| 1175806 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.69 | 51.0 | 3.55e-01 | 79.8% | 22.7% |
| 4871079 | 11.40.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly | 0.68 | 54.0 | 3.65e-01 | 85.7% | 62.2% |
| 4776457 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.67 | 50.0 | 5.09e-01 | 79.8% | 84.0% |
| 3608673 | 109.4.1.194 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 | 0.59 | 42.0 | 2.82e-01 | 75.0% | 36.5% |
| 3360309 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.56 | 41.0 | 3.92e-01 | 78.6% | 99.0% |
| 4973946 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.54 | 31.0 | 3.26e-01 | 94.0% | 60.0% |
| 4045981 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 39.0 | 3.88e-01 | 77.4% | 96.7% |
| 3482406 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.54 | 25.0 | 3.25e-01 | 75.0% | 97.1% |
| 3742995 | 304.9.1.165 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › eIF3g | 0.52 | 26.0 | 3.25e-01 | 77.4% | 100.0% |
| 3708593 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 37.0 | 3.38e-01 | 76.2% | 80.9% |
| 3284913 | 3781.1.1.1 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain › Ribosomal_L11_N | 0.51 | 35.0 | 3.84e-01 | 71.4% | 100.0% |
| 3721917 | 101.36.1.0 ↗ | alpha arrays › HTH › YetF C-terminal domain › YetF C-terminal domain | 0.51 | 35.0 | 3.80e-01 | 71.4% | 100.0% |
D4
medium
residues 357-441
Domain cluster:
rep: fusion_protein__YP_009094337__Salem_virus__120499__D386-442
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00523.24 best | Fusion_gly | 48.2 | 7.60e-13 | 97.7% | 14.4% |