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fusion_protein
Euk-VirZostera_marina_amalgavirus_1
fusion_protein__YP_009362302__Zostera_marina_amalgavirus_1__1985202
Identity
- Accession:
- YP_009362302 ↗
- Protein ID:
- fusion_protein
- Kingdom:
- euk
Quality
72.1
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Duplopiviricetes›
Durnavirales›
Amalgaviridae›
Amalgavirus›
Zostera_marina_amalgavirus_1
TaxID: 1985202
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-120
Domain cluster:
rep: putative_fusion_protein__YP_003868436__Rhododendron_virus_A__878260__D37-144
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b57A02 | 1.20.58.1910 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 29.0 | 3.05e-01 | 86.9% | 38.7% |
| 6scjA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 42.0 | 2.68e-01 | 72.7% | 58.6% |
| 2kxeA00 | 1.10.8.800 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain | 0.59 | 38.0 | 4.26e-01 | 89.9% | 88.9% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.53 | 36.0 | 3.29e-01 | 71.7% | 86.2% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 37.0 | 3.88e-01 | 74.7% | 95.7% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 36.0 | 3.65e-01 | 74.7% | 91.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3395488 | 148.1.3.113 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TRIP13_C | 0.55 | 47.0 | 4.70e-01 | 97.0% | 95.2% |
| None | — | 0.52 | 36.0 | 2.90e-01 | 87.9% | 34.6% | |
| 3174764 | 148.1.3.113 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TRIP13_C | 0.51 | 40.0 | 4.19e-01 | 85.9% | 95.6% |
D2
medium
residues 188-263
D3
medium
residues 455-560_640-672
Domain cluster:
rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
D4
medium
residues 561-586_614-639_673-691
Domain cluster:
representative
D5
medium
residues 942-1018