fusion_protein

Euk-Vir

Malacosoma_neustria_nucleopolyhedrovirus

fusion_protein__YP_009552260__Malacosoma_neustria_nucleopolyhedrovirus__38012

Identity

68.6 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Malacosoma_neustria_nucleopolyhedrovirus

TaxID: 38012

View cluster (44 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-42_339-359_406-551

PDB

Domain cluster: rep: efp__YP_004376238__Clostera_anachoreta_granulovirus__283675__D22-47_387-525

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	155.8	2.50e-45	80.8%	23.2%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1o5uA00	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.52	27.0	3.58e-01	92.3%	97.7%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3407194	5093.1.1.2 ↗	a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Baculo_F	0.72	53.0	4.06e-01	76.4%	99.0%
4922053	5093.1.1.4 ↗	a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly, Fibritin_C	0.56	48.0	3.70e-01	92.9%	44.6%
2722705	5093.1.1.1 ↗	a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly	0.55	49.0	3.71e-01	97.3%	95.4%
3272865	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.52	25.0	3.50e-01	70.3%	95.3%
3238206	11.2.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain	0.52	28.0	3.62e-01	92.3%	91.4%

D2 medium residues 43-55_328-338_360-405

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	40.8	1.70e-10	72.9%	7.1%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ztmA01	2.40.490.10	Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain	0.59	51.0	4.48e-01	100.0%	77.8%
2dyiA02	2.30.30.240	Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain	0.58	40.0	4.02e-01	72.9%	90.1%
1pm3A00	2.30.30.240	Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain	0.55	39.0	3.93e-01	75.7%	92.8%
5eupA00	3.30.710.10	Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A	0.54	46.0	3.96e-01	100.0%	60.0%
4jbmB01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.53	36.0	3.37e-01	100.0%	53.1%
1g8lA03	2.170.190.11	Mainly Beta › Beta Complex › Molybdopterin biosynthesis moeA protein; domain 3 › Molybdopterin biosynthesis moea protein, domain 3.	0.52	43.0	4.02e-01	95.7%	93.5%
3gg6A00	3.90.79.10	Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase	0.51	42.0	3.44e-01	97.1%	67.4%
2dyoA03	3.10.20.90	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	0.50	36.0	3.43e-01	77.1%	96.4%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3716399	2.1.1.76 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2	0.60	45.0	3.78e-01	100.0%	45.4%
5034646	4.6.1.4 ↗	beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › DUF5749	0.58	48.0	4.70e-01	98.6%	88.7%
3428367	2.1.1.47 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BRCA-2_OB3	0.54	46.0	3.63e-01	100.0%	53.4%
3848320	2.1.1.22 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN	0.54	38.0	3.41e-01	100.0%	49.1%
3508678	300.1.1.2 ↗	a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DNase_II	0.53	42.0	3.55e-01	91.4%	73.8%
3173161	239.3.1.1 ↗	beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin	0.51	38.0	3.20e-01	85.7%	78.6%
2464202	295.1.1.1 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4	0.50	39.0	3.79e-01	94.3%	74.7%

D3 medium residues 56-141_172-262

PDB

Domain cluster: rep: F_protein__YP_009165735__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D49-139_173-272

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	150.0	1.40e-43	100.0%	32.8%

D4 medium residues 263-327

PDB

Domain cluster: rep: envelope_fusion_protein__YP_009552688__Operophtera_brumata_nucleopolyhedrovirus__1046267__D277-336

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	65.0	7.40e-18	100.0%	10.5%