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gH

Euk-Vir

Vombatid_gammaherpesvirus_1

gH__YP_010087392__Vombatid_gammaherpesvirus_1__2052651

Identity

Accession:
YP_010087392 ↗
Protein ID:
gH
Kingdom:
euk

Quality

82.1 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Manticavirus› Vombatid_gammaherpesvirus_1

TaxID: 2052651

Cluster

View cluster (43 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 385-546
PDB
Domain cluster: rep: envelope_glycoprotein_H__YP_009388523__Common_bottlenose_dolphin_gammaherpesvirus_1_strain_Sarasota__2022783__D447-588
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02489.22 best Herpes_glycop_H 124.4 7.70e-36 99.4% 30.5%
D2 medium residues 42-81
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5w0kA01 3.90.380.20 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II 0.80 68.0 4.01e-01 100.0% 12.3%
2jl8102 3.30.160.850 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 35.0 3.43e-01 75.0% 42.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 3.27e-01 87.5% 72.9%
1mukA02 3.90.1850.10 Alpha Beta › Alpha-Beta Complex › RNA-directed RNA polymerase lambda-3 › RNA-directed RNA polymerase lambda-3 0.58 44.0 2.53e-01 85.0% 44.1%
4p1mB01 3.30.160.880 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain 0.58 34.0 3.30e-01 92.5% 48.9%
5cygB00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.57 46.0 2.82e-01 92.5% 64.3%
1g8mA02 3.40.140.20 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain 0.55 41.0 2.71e-01 82.5% 28.4%
1uhvA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 43.0 2.61e-01 97.5% 39.5%
4dnhA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 43.0 2.58e-01 100.0% 85.9%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 42.0 2.55e-01 95.0% 47.6%
2f1rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 2.98e-01 97.5% 95.9%
1qmgB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 39.0 2.49e-01 85.0% 81.9%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.21e-01 100.0% 36.7%
1tedA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 36.0 2.66e-01 90.0% 55.7%
4jaqA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 36.0 2.69e-01 92.5% 57.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2701125 3146.1.1.1 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.88 75.0 4.12e-01 100.0% 7.6%
2095478 3146.1.1.1 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.78 66.0 3.69e-01 100.0% 7.9%
4481010 857.1.1.1 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.61 36.0 2.66e-01 92.5% 23.0%
4984126 3396.1.1.0 ↗ extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A 0.61 45.0 3.90e-01 82.5% 50.8%
4582420 327.16.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N 0.60 45.0 3.68e-01 95.0% 83.2%
4968841 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 49.0 2.94e-01 100.0% 50.2%
5077887 304.139.1.2 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.57 38.0 2.50e-01 80.0% 13.5%
5076168 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.57 40.0 3.24e-01 77.5% 36.5%
3307706 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.55 38.0 2.71e-01 72.5% 48.6%
5025256 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 41.0 2.40e-01 100.0% 9.5%
3530014 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.54 44.0 2.44e-01 100.0% 34.6%
3338123 109.4.1.1335 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.54 37.0 2.09e-01 100.0% 5.3%
5055105 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 3.36e-01 82.5% 95.7%
3587660 857.1.1.1 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA 0.52 39.0 2.64e-01 100.0% 22.9%
4110276 1.1.3.4 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › SymE_toxin 0.52 35.0 2.84e-01 70.0% 47.1%
3327661 2007.1.4.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › PFK 0.52 39.0 2.43e-01 100.0% 27.0%
4959094 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.52 43.0 3.95e-01 95.0% 98.2%
5038557 101.1.2.934 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.52 42.0 3.29e-01 100.0% 75.0%
4457759 327.16.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N 0.51 39.0 3.25e-01 97.5% 85.6%
3733428 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.51 41.0 2.90e-01 95.0% 42.1%
3767059 101.1.2.506 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.51 39.0 2.87e-01 100.0% 69.0%
5065366 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.51 39.0 3.01e-01 100.0% 58.3%
3580090 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.51 36.0 2.61e-01 100.0% 23.8%
4119925 7581.1.1.6 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.50 36.0 2.71e-01 92.5% 57.2%
D3 medium residues 82-121_163-275
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02489.22 best Herpes_glycop_H 48.4 8.00e-13 75.2% 22.6%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5w0kA01 3.90.380.20 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II 0.93 90.0 6.77e-01 100.0% 59.7%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.58 26.0 3.77e-01 71.9% 90.1%
2xsgB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 40.0 3.23e-01 71.2% 75.1%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.53 36.0 3.71e-01 79.7% 71.1%
3tu3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 30.0 3.34e-01 94.1% 68.9%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.52 31.0 3.59e-01 79.7% 84.0%
2qguA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 28.0 3.40e-01 81.7% 80.2%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.51 25.0 3.20e-01 72.5% 80.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2095478 3146.1.1.1 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.93 90.0 5.94e-01 100.0% 38.1%
2701125 3146.1.1.1 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.84 81.0 5.41e-01 100.0% 37.2%
2095503 3146.1.1.1 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.76 72.0 4.81e-01 100.0% 39.3%
4983588 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 29.0 3.94e-01 73.9% 89.3%
3989328 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.53 28.0 3.51e-01 93.5% 83.0%
D4 medium residues 122-162_276-384
PDB
Domain cluster: rep: Glycoprotein_H__YP_009552485__Eptesicus_fuscus_gammaherpesvirus__2035399__D124-144_159-177_315-399
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02489.22 best Herpes_glycop_H 58.2 8.50e-16 72.7% 19.8%
D5 medium residues 555-613
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17488.8 best Herpes_glycoH_C 40.8 2.40e-10 98.3% 39.0%
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 54.0 4.46e-01 81.4% 76.5%
1v4pC01 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.71 62.0 5.02e-01 96.6% 88.9%
7zqiA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 52.0 4.58e-01 81.4% 82.6%
4lfhD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 51.0 4.56e-01 81.4% 70.6%
1i8dA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 54.0 4.72e-01 88.1% 70.8%
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.67 52.0 3.64e-01 84.7% 82.4%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 53.0 4.64e-01 88.1% 70.8%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 57.0 3.78e-01 96.6% 82.4%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 51.0 4.28e-01 84.7% 73.3%
3a35A02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 53.0 4.57e-01 88.1% 68.5%
1kzlA02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 52.0 4.37e-01 88.1% 63.4%
1rwhA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 55.0 3.58e-01 96.6% 88.2%
3efoB03 2.60.40.1670 Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 0.63 50.0 3.85e-01 86.4% 81.0%
6ewnA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 46.0 3.90e-01 79.7% 96.0%
1rl1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 46.0 4.01e-01 79.7% 85.9%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 44.0 4.45e-01 89.8% 75.9%
1shsA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 54.0 4.28e-01 96.6% 91.3%
3cj1A02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.61 46.0 2.98e-01 81.4% 43.7%
2gqwA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.61 42.0 3.60e-01 71.2% 59.6%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 46.0 3.99e-01 81.4% 93.1%
3mcaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 48.0 3.86e-01 88.1% 59.3%
1gmeA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 3.69e-01 91.5% 85.3%
3w1zC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 53.0 4.10e-01 98.3% 91.5%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 46.0 4.49e-01 96.6% 75.8%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 54.0 3.27e-01 100.0% 22.0%
3ejjX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 3.67e-01 79.7% 67.4%
3u7vA02 2.60.220.20 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus 0.58 48.0 3.74e-01 98.3% 77.8%
5xogK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.57 43.0 3.61e-01 84.7% 61.9%
1ao8A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.57 45.0 3.31e-01 86.4% 95.7%
7pjjA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 3.73e-01 93.2% 61.5%
5u8rA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 3.74e-01 88.1% 73.1%
7plsA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 49.0 4.22e-01 96.6% 97.8%
4hikA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 3.58e-01 89.8% 73.2%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 49.0 4.25e-01 94.9% 71.9%
1nh2D02 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.56 40.0 4.39e-01 88.1% 93.8%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 42.0 3.95e-01 88.1% 72.2%
4kc3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 3.62e-01 84.7% 72.6%
4feiA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 3.78e-01 96.6% 52.9%
2jzjA01 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 47.0 3.87e-01 100.0% 62.2%
2di7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.53e-01 88.1% 76.6%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 45.0 3.33e-01 93.2% 49.7%
5evhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 46.0 3.70e-01 100.0% 77.7%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.68e-01 88.1% 76.7%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.53 46.0 3.36e-01 96.6% 54.0%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 42.0 3.73e-01 91.5% 84.8%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.52 44.0 3.09e-01 96.6% 32.5%
3plsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 36.0 3.16e-01 79.7% 70.2%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 43.0 3.82e-01 100.0% 82.6%
1xxmC01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.51 38.0 3.65e-01 100.0% 68.9%
3glaA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.64e-01 94.9% 60.8%
2covG00 2.60.40.2450 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain 0.50 38.0 3.43e-01 86.4% 65.9%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 43.0 3.26e-01 94.9% 56.7%
7mjrA04 2.60.40.1790 Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve 0.50 38.0 3.42e-01 88.1% 75.0%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 34.0 2.80e-01 88.1% 35.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1936537 3145.1.1.1 ↗ beta sandwiches › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › Herpes_glycoH_C 0.87 80.0 5.80e-01 100.0% 39.6%
3787213 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.72 54.0 4.28e-01 79.7% 73.0%
4678749 306.1.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB 0.71 61.0 5.93e-01 94.9% 89.2%
3941331 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 51.0 4.02e-01 79.7% 52.5%
3628210 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.68 51.0 4.49e-01 79.7% 97.6%
3739716 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.68 52.0 4.12e-01 81.4% 83.5%
4962569 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.68 52.0 3.83e-01 81.4% 65.5%
3248540 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 50.0 4.06e-01 79.7% 79.1%
4298725 11.1.1.673 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N 0.67 51.0 4.23e-01 81.4% 55.0%
4659014 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 50.0 4.00e-01 79.7% 82.3%
3246495 109.4.1.72 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.67 48.0 2.76e-01 81.4% 8.3%
3735669 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 51.0 4.28e-01 81.4% 88.7%
3288315 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 51.0 3.93e-01 81.4% 74.4%
2900289 12.3.1.28 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N 0.66 57.0 3.82e-01 96.6% 86.3%
4951155 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.66 53.0 3.94e-01 84.7% 73.6%
4958002 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.66 52.0 4.09e-01 86.4% 89.6%
4498712 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.66 50.0 3.95e-01 81.4% 78.2%
5020267 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.65 53.0 3.96e-01 86.4% 80.0%
1699918 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.64 51.0 3.93e-01 86.4% 77.3%
4947005 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.63 47.0 3.78e-01 81.4% 79.0%
4936979 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 49.0 3.77e-01 84.7% 79.2%
3230075 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.62 47.0 3.86e-01 84.7% 59.2%
3452316 220.1.1.187 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C 0.62 54.0 3.87e-01 94.9% 61.2%
4205157 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 54.0 4.24e-01 96.6% 91.2%
4153967 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.62 43.0 3.46e-01 91.5% 38.1%
5076783 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.61 47.0 3.94e-01 84.7% 88.6%
3272576 11.1.1.820 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.61 50.0 3.99e-01 88.1% 60.0%
4988150 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.60 53.0 4.43e-01 100.0% 81.9%
5044384 306.3.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.60 46.0 4.08e-01 83.1% 74.1%
4399144 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 49.0 3.75e-01 89.8% 85.9%
3415261 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.60 53.0 3.83e-01 96.6% 77.4%
3309018 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 51.0 3.74e-01 93.2% 88.7%
5074781 241.9.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 0.59 51.0 4.10e-01 100.0% 69.4%
4931267 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 51.0 3.81e-01 94.9% 76.4%
3283270 881.1.1.15 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 0.58 50.0 3.82e-01 96.6% 62.1%
3565424 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.58 51.0 3.95e-01 96.6% 66.4%
3582493 5.1.4.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.58 46.0 2.81e-01 88.1% 30.7%
4963727 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 44.0 2.91e-01 83.1% 51.0%
5069036 11.1.1.124 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_B 0.57 44.0 4.02e-01 84.7% 65.0%
4611007 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 50.0 4.05e-01 100.0% 86.0%
4964479 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 46.0 3.83e-01 94.9% 92.2%
3869391 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 3.74e-01 86.4% 68.0%
3927242 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.56 44.0 4.04e-01 100.0% 65.0%
3193570 2003.1.3.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like 0.55 47.0 2.73e-01 93.2% 81.4%
4547794 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.55 46.0 3.53e-01 89.8% 48.4%
3626089 7579.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.55 48.0 2.76e-01 100.0% 11.6%
4068524 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.55 46.0 3.49e-01 89.8% 48.1%
4488657 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 45.0 3.45e-01 89.8% 46.9%
3163889 2.1.1.139 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Slp 0.54 45.0 3.42e-01 88.1% 69.6%
2583626 331.3.1.14 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3568 0.53 46.0 3.74e-01 100.0% 72.4%
3593399 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 44.0 3.61e-01 93.2% 90.9%
3516227 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 39.0 3.47e-01 88.1% 70.0%
2697168 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 44.0 3.64e-01 94.9% 54.3%
3996793 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.84e-01 81.4% 96.7%
3663152 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 40.0 3.18e-01 96.6% 78.0%
3497653 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.32e-01 91.5% 73.0%
4963301 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 43.0 3.45e-01 94.9% 49.6%
D6 medium residues 614-702
PDB
Domain cluster: rep: envelope_glycoprotein_H__YP_004936041__Cercopithecine_betaherpesvirus_5__50292__D611-687
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17488.8 best Herpes_glycoH_C 103.9 8.50e-30 100.0% 58.9%