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gag_polyprotein
Euk-VirYellow-breasted_capuchin_simian_foamy_virus
gag_polyprotein__YP_009508581__Yellow-breasted_capuchin_simian_foamy_virus__2170206
Identity
- Accession:
- YP_009508581 ↗
- Protein ID:
- gag_polyprotein
- Kingdom:
- euk
Quality
58.5
mean pLDDT
Taxonomy
Pararnavirae›
Artverviricota›
Revtraviricetes›
Ortervirales›
Retroviridae›
Simiispumavirus›
Yellow-breasted_capuchin_simian_foamy_virus
TaxID: 2170206
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-129
Domain cluster:
rep: gag__YP_009508576__White-tufted-ear_marmoset_simian_foamy_virus__2170205__D10-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03276.20 best | Gag_spuma_N | 161.8 | 1.30e-47 | 97.5% | 81.7% |
D2
medium
residues 283-450
Domain cluster:
rep: gag__YP_009513241__Rhesus_macaque_simian_foamy_virus__2170199__D297-457
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20672.4 best | Gag_FV_central | 251.9 | 3.60e-75 | 100.0% | 97.1% |