←Back to structures
gag_protein
Euk-VirBrown_greater_galago_prosimian_foamy_virus
gag_protein__YP_009508541__Brown_greater_galago_prosimian_foamy_virus__2170139
Identity
- Accession:
- YP_009508541 ↗
- Protein ID:
- gag_protein
- Kingdom:
- euk
Quality
58.1
mean pLDDT
Taxonomy
Pararnavirae›
Artverviricota›
Revtraviricetes›
Ortervirales›
Retroviridae›
Prosimiispumavirus›
Brown_greater_galago_prosimian_foamy_virus
TaxID: 2170139
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-192
Domain cluster:
rep: gag_protein__YP_009508555__Japanese_macaque_simian_foamy_virus__2170198__D5-133
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03276.20 best | Gag_spuma_N | 84.5 | 9.10e-24 | 92.2% | 88.0% |
D2
medium
residues 299-467
Domain cluster:
rep: gag__YP_009513241__Rhesus_macaque_simian_foamy_virus__2170199__D297-457
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20672.4 best | Gag_FV_central | 257.8 | 5.60e-77 | 100.0% | 98.3% |