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gag_protein
Euk-VirEastern_chimpanzee_simian_foamy_virus
gag_protein__YP_009508550__Eastern_chimpanzee_simian_foamy_virus__2170195
Identity
- Accession:
- YP_009508550 ↗
- Protein ID:
- gag_protein
- Kingdom:
- euk
Quality
62.6
mean pLDDT
Taxonomy
Pararnavirae›
Artverviricota›
Revtraviricetes›
Ortervirales›
Retroviridae›
Simiispumavirus›
Eastern_chimpanzee_simian_foamy_virus
TaxID: 2170195
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-155
Domain cluster:
rep: gag_protein__YP_009508555__Japanese_macaque_simian_foamy_virus__2170198__D5-133
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03276.20 best | Gag_spuma_N | 226.8 | 1.20e-67 | 96.6% | 100.0% |
D2
medium
residues 307-467
Domain cluster:
rep: gag__YP_009513241__Rhesus_macaque_simian_foamy_virus__2170199__D297-457
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20672.4 best | Gag_FV_central | 260.7 | 6.90e-78 | 100.0% | 93.1% |