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gag_protein
Euk-VirSimian_foamy_virus_Pongo_pygmaeus_pygmaeus
gag_protein__YP_009508887__Simian_foamy_virus_Pongo_pygmaeus_pygmaeus__221703
Identity
- Accession:
- YP_009508887 ↗
- Protein ID:
- gag_protein
- Kingdom:
- euk
Quality
64.0
mean pLDDT
Taxonomy
Pararnavirae›
Artverviricota›
Revtraviricetes›
Ortervirales›
Retroviridae›
Simiispumavirus›
Simian_foamy_virus_Pongo_pygmaeus_pygmaeus
TaxID: 221703
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-152
Domain cluster:
rep: gag_protein__YP_009508555__Japanese_macaque_simian_foamy_virus__2170198__D5-133
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03276.20 best | Gag_spuma_N | 240.2 | 8.90e-72 | 96.0% | 100.0% |
D2
medium
residues 284-444
Domain cluster:
rep: gag__YP_009513241__Rhesus_macaque_simian_foamy_virus__2170199__D297-457
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20672.4 best | Gag_FV_central | 259.2 | 2.10e-77 | 100.0% | 93.1% |