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gag_protein
Euk-VirSimian_T-lymphotropic_virus_2
gag_protein__YP_567048__Simian_T-lymphotropic_virus_2__33748
Identity
- Accession:
- YP_567048 ↗
- Protein ID:
- gag_protein
- Kingdom:
- euk
Quality
69.0
mean pLDDT
Taxonomy
Pararnavirae›
Artverviricota›
Revtraviricetes›
Ortervirales›
Retroviridae›
Deltaretrovirus›
Simian_T-lymphotropic_virus_2
TaxID: 33748
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-91
Domain cluster:
rep: p19_MA__NP_955617__Human_T-cell_leukemia_virus_type_I__11908__D20-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02228.22 best | Gag_p19 | 132.8 | 6.90e-39 | 100.0% | 76.1% |
D2
medium
residues 152-258
Domain cluster:
rep: gag_protein__YP_009305199__Simian_retrovirus_8__1904439__D302-440
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00607.26 best | Gag_p24 | 38.0 | 2.00e-09 | 100.0% | 90.6% |
D3
medium
residues 267-344
Domain cluster:
rep: p24_CA__NP_955618__Human_T-cell_leukemia_virus_type_I__11908__D133-202
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19317.5 best | Gag_p24_C | 93.0 | 1.00e-26 | 89.7% | 93.2% |