←Back to structures

global_transactivator-like_protein

Euk-Vir

Condylorrhiza_vestigialis_MNPV

global_transactivator-like_protein__YP_009118582__Condylorrhiza_vestigialis_MNPV__1592576

Identity

Accession:
YP_009118582 ↗
Protein ID:
global_transactivator-like_protein
Kingdom:
euk

Quality

83.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Condylorrhiza_vestigialis_mutiple_nucleopolyhedrovirus

TaxID: 1592576

Cluster

View cluster (178 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-239
PDB
Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF00176.30 best SNF2-rel_dom 154.4 4.90e-45 100.0% 70.5%
PF04851.22 ResIII 28.0 2.70e-06 74.1% 83.5%
PF00270.36 DEAD 30.4 4.20e-07 73.6% 70.7%
D2 medium residues 240-256_327-485
PDB
Domain cluster: rep: OQ622096.1__WGH28569.1__13VV501A_gene0073__00071__D542-667
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00271.38 best Helicase_C 66.2 4.20e-18 65.9% 97.3%
D3 medium residues 257-326_486-497
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m7gA02 1.10.8.1010 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.82 57.0 5.43e-01 72.0% 78.9%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.81 66.0 5.70e-01 85.4% 100.0%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.81 57.0 4.84e-01 73.2% 73.1%
2oezA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.78 55.0 4.28e-01 72.0% 68.7%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.76 61.0 5.00e-01 85.4% 79.2%
2pybA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.75 61.0 4.87e-01 85.4% 80.8%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.74 60.0 4.83e-01 85.4% 79.2%
4y9jA01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.74 57.0 4.65e-01 81.7% 91.3%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.74 52.0 4.40e-01 72.0% 70.8%
3rguB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.74 51.0 5.00e-01 70.7% 83.9%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.73 58.0 4.88e-01 85.4% 78.3%
2ip6A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.72 52.0 5.17e-01 76.8% 100.0%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.70 50.0 4.91e-01 74.4% 100.0%
4gouA03 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.70 55.0 4.17e-01 85.4% 85.8%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.68 54.0 5.94e-01 85.4% 100.0%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.67 55.0 5.00e-01 85.4% 71.2%
2qf9A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 52.0 4.24e-01 85.4% 78.2%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.66 43.0 4.55e-01 85.4% 74.3%
4etrB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 51.0 4.52e-01 84.1% 74.6%
1un8A02 1.25.40.340 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain 0.66 48.0 3.67e-01 76.8% 53.1%
1tmxB00 2.60.130.10 Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase 0.66 41.0 2.85e-01 84.1% 18.1%
2yjkC00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 51.0 4.18e-01 85.4% 75.2%
3bt5A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.65 51.0 4.22e-01 85.4% 77.5%
4btfA01 1.20.930.20 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain 0.64 49.0 4.57e-01 80.5% 97.0%
3i1aA03 1.20.58.840 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 43.0 3.90e-01 70.7% 67.2%
6khjH01 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.63 55.0 3.64e-01 100.0% 85.8%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.62 47.0 4.64e-01 79.3% 98.8%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 48.0 3.79e-01 85.4% 67.4%
2m6uA00 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.61 45.0 4.56e-01 79.3% 80.5%
3caxA01 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.61 55.0 4.04e-01 100.0% 53.5%
2clbA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.60 47.0 3.84e-01 85.4% 74.8%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.60 53.0 5.03e-01 95.1% 91.8%
7rkxR01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.60 52.0 3.66e-01 98.8% 78.2%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.59 39.0 3.09e-01 85.4% 31.2%
3pjaJ01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.59 55.0 4.60e-01 100.0% 87.8%
4i3vA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.59 45.0 3.19e-01 84.1% 77.3%
4q5qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 50.0 4.61e-01 96.3% 93.3%
1b48A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.56 47.0 4.29e-01 91.5% 82.6%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.55 49.0 3.69e-01 98.8% 73.9%
2lwxA00 1.10.8.840 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain 0.55 34.0 3.38e-01 72.0% 56.8%
3bhqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 44.0 3.37e-01 96.3% 51.5%
2k3qA00 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.51 39.0 3.57e-01 85.4% 100.0%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3208371 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.84 79.0 5.19e-01 98.8% 85.0%
3170797 605.4.1.4 ↗ alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › DUF202 0.83 57.0 4.91e-01 70.7% 70.0%
3739042 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.81 76.0 5.09e-01 100.0% 95.3%
3221996 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.78 53.0 4.33e-01 70.7% 59.3%
3277476 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.77 61.0 4.99e-01 85.4% 82.0%
3201381 192.8.1.139 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Fung_rhodopsin 0.77 54.0 5.72e-01 84.1% 80.0%
3395581 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.77 59.0 5.01e-01 82.9% 91.1%
3235853 632.6.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit 0.76 54.0 5.49e-01 73.2% 82.5%
4975860 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.76 53.0 5.27e-01 72.0% 82.4%
3182665 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.75 51.0 4.91e-01 70.7% 80.0%
3229885 4044.1.1.0 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.75 52.0 4.89e-01 72.0% 73.5%
5053994 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.74 51.0 5.38e-01 72.0% 84.0%
3587595 2004.1.1.363 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.74 58.0 3.26e-01 85.4% 63.6%
4528489 633.2.1.0 ↗ alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein 0.72 54.0 5.16e-01 79.3% 94.7%
4462677 2004.1.1.363 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.72 57.0 3.21e-01 85.4% 64.9%
4981709 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.72 56.0 4.75e-01 85.4% 85.0%
3697925 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.70 56.0 4.39e-01 84.1% 90.6%
4943152 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.69 47.0 4.33e-01 72.0% 62.7%
1180303 632.19.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › RICH 0.68 47.0 4.71e-01 72.0% 84.1%
3523264 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.67 51.0 4.45e-01 82.9% 97.7%
4297295 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.67 46.0 4.81e-01 70.7% 78.7%
5070523 4044.1.1.0 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.65 45.0 4.30e-01 72.0% 68.4%
3829876 3562.1.1.11 ↗ alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › PGG 0.64 50.0 4.13e-01 82.9% 84.1%
5051636 601.3.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.63 58.0 4.82e-01 100.0% 69.6%
3638386 603.1.1.111 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N 0.62 54.0 4.95e-01 93.9% 78.1%
3509024 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 56.0 5.07e-01 96.3% 79.0%
3222544 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.61 55.0 4.59e-01 95.1% 80.8%
3732909 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.60 53.0 5.43e-01 93.9% 96.2%
3892002 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.60 54.0 4.29e-01 96.3% 57.4%
3312910 603.1.1.111 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N 0.59 50.0 4.89e-01 90.2% 88.9%
3820045 603.1.1.118 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF7610 0.59 52.0 5.13e-01 92.7% 92.9%
3197471 603.1.1.179 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TPR_VPS8_2 0.59 53.0 3.87e-01 97.6% 62.8%
3516461 603.1.1.103 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.57 51.0 4.60e-01 96.3% 84.5%
3714806 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.57 49.0 3.36e-01 95.1% 38.6%
3720488 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.54 50.0 4.24e-01 100.0% 68.5%
3296047 6155.1.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.54 44.0 4.35e-01 97.6% 85.9%
3774851 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.52 46.0 3.41e-01 100.0% 94.0%
3580104 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 45.0 4.29e-01 97.6% 92.6%
3390898 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.50 45.0 4.22e-01 100.0% 89.0%