glycoprotein_B

Euk-Vir

Cricetid_gammaherpesvirus_2

glycoprotein_B__YP_004207848__Cricetid_gammaherpesvirus_2__1605972

Identity

70.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Cricetid_gammaherpesvirus_2

TaxID: 1605972

View cluster (42 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 515-604

PDB

Domain cluster: rep: envelope_glycoprotein_B__YP_009342376__Spheniscid_alphaherpesvirus_1__2560777__D566-653

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00606.24 best	Glycoprotein_B	105.1	5.40e-30	100.0%	39.2%

D2 medium residues 85-96_302-401

PDB

Domain cluster: rep: BALF4__YP_010084703__Lymphocryptovirus_Macaca_pfe-lcl-E3__1716044__D77-88_295-391

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17417.9 best	Glycoprot_B_PH2	106.3	1.20e-30	85.7%	97.9%

D3 medium residues 99-218

PDB

Domain cluster: rep: envelope_glycoprotein_B__YP_009344884__Murine_roseolovirus__1940555__D81-138_150-207

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17416.9 best	Glycoprot_B_PH1	138.5	3.40e-40	100.0%	56.2%

D4 medium residues 462-514

PDB

Domain cluster: rep: JM12__YP_238315__Macaca_fuscata_rhadinovirus__272551__D450-511

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00606.24 best	Glycoprotein_B	82.2	5.50e-23	100.0%	23.9%