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glycoprotein_B
Euk-VirBovine_gammaherpesvirus_6
glycoprotein_B__YP_009041989__Bovine_gammaherpesvirus_6__1504288
Identity
- Accession:
- YP_009041989 ↗
- Protein ID:
- glycoprotein_B
- Kingdom:
- euk
Quality
70.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Bovine_gammaherpesvirus_6
TaxID: 1504288
Cluster
View cluster (42 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 126-137_251-336
Domain cluster:
rep: Cy89__YP_009337505__Cynomolgus_cytomegalovirus__1919083__D227-314_636-647
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17416.9 best | Glycoprot_B_PH1 | 102.8 | 2.90e-29 | 91.8% | 41.4% |
D2
medium
residues 138-250
Domain cluster:
rep: envelope_glycoprotein_B__YP_009344884__Murine_roseolovirus__1940555__D81-138_150-207
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17416.9 best | Glycoprot_B_PH1 | 129.7 | 1.70e-37 | 100.0% | 53.3% |
D3
medium
residues 337-425
Domain cluster:
rep: BALF4__YP_010084703__Lymphocryptovirus_Macaca_pfe-lcl-E3__1716044__D77-88_295-391
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17417.9 best | Glycoprot_B_PH2 | 102.2 | 2.20e-29 | 97.8% | 89.7% |
D4
medium
residues 546-629
Domain cluster:
rep: envelope_glycoprotein_B__YP_009342376__Spheniscid_alphaherpesvirus_1__2560777__D566-653
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00606.24 best | Glycoprotein_B | 102.0 | 5.00e-29 | 100.0% | 37.8% |
D5
medium
residues 729-789