←Back to structures
glycoprotein_H
Euk-VirMacropodid_alphaherpesvirus_1
glycoprotein_H__YP_009227255__Macropodid_alphaherpesvirus_1__137443
Identity
- Accession:
- YP_009227255 ↗
- Protein ID:
- glycoprotein_H
- Kingdom:
- euk
Quality
73.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Macropodid_alphaherpesvirus_1
TaxID: 137443
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 91-157_180-201
D2
medium
residues 202-275_331-343_362-395
Domain cluster:
representative
D3
medium
residues 276-330_344-361
Domain cluster:
rep: envelope_glycoprotein_H__YP_010087581__Cervid_alphaherpesvirus_3__2115790__D207-328
D4
medium
residues 601-683
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.55 | 46.0 | 4.52e-01 | 95.2% | 93.5% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.51 | 38.0 | 3.63e-01 | 83.1% | 98.0% |
D5
medium
residues 700-835
Domain cluster:
rep: UL22__YP_003084400__Anatid_alphaherpesvirus_1__104388__D647-783
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17488.8 best | Herpes_glycoH_C | 53.6 | 2.90e-14 | 96.3% | 89.4% |