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glycoprotein_UL100
Euk-VirCynomolgus_macaque_cytomegalovirus_strain_Ottawa
glycoprotein_UL100__YP_004933878__Cynomolgus_macaque_cytomegalovirus_strain_Ottawa__944969
Identity
- Accession:
- YP_004933878 ↗
- Protein ID:
- glycoprotein_UL100
- Kingdom:
- euk
Quality
83.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cynomolgus_macaque_cytomegalovirus_strain_Ottawa
TaxID: 944969
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-50_67-325
Domain cluster:
rep: glycoprotein_M__YP_009551849__Rhinolophus_gammaherpesvirus_1__2054179__D5-329
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01528.23 best | Herpes_glycop | 300.7 | 1.90e-89 | 99.3% | 96.7% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.73 | 46.0 | 5.76e-01 | 88.5% | 99.0% |
| 2jswA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.72 | 44.0 | 5.53e-01 | 71.1% | 97.9% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 34.0 | 4.21e-01 | 87.9% | 77.6% |
| 2pfdA03 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.65 | 42.0 | 5.08e-01 | 75.1% | 95.6% |
| 2xs1A01 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.63 | 44.0 | 4.19e-01 | 92.8% | 59.4% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 34.0 | 4.47e-01 | 85.9% | 94.6% |
| 3qkyA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 37.0 | 4.06e-01 | 96.7% | 70.1% |
| 4g1tA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 32.0 | 3.62e-01 | 92.5% | 62.0% |
| 1xwmA00 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 38.0 | 4.43e-01 | 74.4% | 86.8% |
| 2nyfA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.60 | 36.0 | 3.60e-01 | 75.7% | 55.5% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.59 | 43.0 | 4.17e-01 | 73.4% | 91.2% |
| 1qoyA00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.58 | 42.0 | 4.24e-01 | 72.5% | 86.8% |
| 1ciyA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.57 | 38.0 | 4.45e-01 | 75.1% | 91.9% |
| 2c9kA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.57 | 41.0 | 4.56e-01 | 78.0% | 92.5% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.56 | 39.0 | 3.76e-01 | 70.8% | 94.6% |
| 4c0eA01 | 1.25.40.790 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 36.0 | 3.73e-01 | 98.7% | 67.1% |
| 4p3fA00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.54 | 34.0 | 4.13e-01 | 84.9% | 95.3% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.53 | 35.0 | 3.86e-01 | 79.3% | 77.3% |
| 1n1bB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.53 | 39.0 | 3.96e-01 | 79.7% | 74.4% |
| 3efzB00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.53 | 34.0 | 3.93e-01 | 81.0% | 86.7% |
| 1hxaA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.53 | 39.0 | 3.70e-01 | 80.0% | 62.9% |
| 2azjA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 36.0 | 3.82e-01 | 80.7% | 75.7% |
| 1x04A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 32.0 | 3.93e-01 | 88.9% | 92.5% |
| 4jkvB02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 40.0 | 3.86e-01 | 80.7% | 88.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2617496 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.65 | 40.0 | 4.88e-01 | 92.5% | 92.9% |
| 5026949 | 604.5.1.1 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div | 0.65 | 41.0 | 4.77e-01 | 85.6% | 87.0% |
| 4947656 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 44.0 | 4.17e-01 | 92.5% | 57.0% |
| 2818706 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.59 | 44.0 | 4.99e-01 | 96.4% | 99.6% |
| 3705272 | 5001.1.1.8 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HlyIII | 0.58 | 44.0 | 4.45e-01 | 80.3% | 77.0% |
| 3645154 | 109.4.1.1315 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_8, TPR_10, TPR_12 | 0.57 | 38.0 | 3.35e-01 | 91.8% | 45.6% |
| 3275050 | 5001.1.1.8 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HlyIII | 0.55 | 40.0 | 4.27e-01 | 74.8% | 84.0% |
| 4024537 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 36.0 | 4.32e-01 | 71.5% | 99.5% |
| 3995562 | 602.2.1.0 ↗ | alpha arrays › L-aspartase middle domain-like › RNA-binding protein She2p › RNA-binding protein She2p | 0.54 | 40.0 | 4.41e-01 | 74.4% | 94.3% |
| 3817768 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.53 | 39.0 | 3.87e-01 | 80.0% | 69.7% |
| 3600028 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 44.0 | 4.25e-01 | 96.7% | 78.3% |
| 3641759 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.50 | 38.0 | 3.65e-01 | 79.7% | 67.2% |
| 3659038 | 603.1.1.102 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF3537 | 0.50 | 43.0 | 4.10e-01 | 92.1% | 97.3% |
| 4089920 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.50 | 37.0 | 3.69e-01 | 79.7% | 71.1% |
| 5073793 | 109.4.1.218 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP | 0.50 | 33.0 | 3.29e-01 | 95.4% | 61.3% |
| 5014601 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 34.0 | 3.65e-01 | 91.8% | 76.9% |