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glycoprotein

Euk-Vir

Vesicular_stomatitis_New_Jersey_virus

glycoprotein__YP_009047084__Vesicular_stomatitis_New_Jersey_virus__11280

Identity

Accession:
YP_009047084 ↗
Protein ID:
glycoprotein
Kingdom:
euk

Quality

78.0 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Vesiculovirus› Vesicular_stomatitis_New_Jersey_virus

TaxID: 11280

Cluster

View cluster (70 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-49_304-423
PDB
Domain cluster: rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24833.2 best Rhabdo_glycop_CD 103.9 8.80e-30 72.4% 76.9%
D2 high residues 53-64_197-285
PDB
Domain cluster: rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294
D3 high residues 70-193
PDB
Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00974.25 best Rhabdo_glycop_FD 119.3 1.40e-34 80.7% 100.0%