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glycoprotein
Euk-VirTench_rhabdovirus
glycoprotein__YP_009094205__Tench_rhabdovirus__1288358
Identity
- Accession:
- YP_009094205 ↗
- Protein ID:
- glycoprotein
- Kingdom:
- euk
Quality
74.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sprivivirus›
Tench_rhabdovirus
TaxID: 1288358
Cluster
View cluster (70 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-47_309-418
Domain cluster:
rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24833.2 best | Rhabdo_glycop_CD | 68.0 | 1.20e-18 | 65.9% | 65.3% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d6wA01 | 2.30.30.640 | Mainly Beta › Roll › SH3 type barrels. › Rhabdovirus spike glycoprotein G, lateral domain | 0.87 | 56.0 | 6.87e-01 | 87.7% | 97.8% |
D2
high
residues 55-66_197-265
Domain cluster:
rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294
D3
high
residues 71-188
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 107.4 | 7.30e-31 | 84.8% | 100.0% |