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glycoprotein

Euk-Vir

Parrot_bornavirus_4

glycoprotein__YP_009268897__Parrot_bornavirus_4__1548718

Identity

Accession:
YP_009268897 ↗
Protein ID:
glycoprotein
Kingdom:
euk

Quality

63.5 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Bornaviridae› Orthobornavirus› Parrot_bornavirus_4

TaxID: 1548718

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-64_188-232
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06208.18 best BDV_G 43.6 2.10e-11 96.4% 9.6%
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 52.0 3.76e-01 82.1% 70.2%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.69 60.0 4.72e-01 100.0% 85.1%
3cp3A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 52.0 4.01e-01 82.1% 83.5%
3cp7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 50.0 4.06e-01 80.4% 87.4%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 52.0 3.87e-01 83.9% 86.7%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.44e-01 100.0% 60.3%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 5.08e-01 100.0% 97.9%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 46.0 4.26e-01 80.4% 89.2%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.91e-01 100.0% 88.7%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 46.0 3.27e-01 80.4% 71.6%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 52.0 4.35e-01 100.0% 81.8%
7kcgA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 52.0 4.10e-01 100.0% 97.7%
4lqzA00 2.40.128.570 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 0.61 52.0 4.09e-01 100.0% 97.7%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 46.0 4.46e-01 85.7% 84.8%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 3.67e-01 100.0% 44.0%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 52.0 4.09e-01 100.0% 64.5%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.60 52.0 3.91e-01 100.0% 78.1%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 51.0 3.98e-01 100.0% 94.7%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 43.0 3.47e-01 80.4% 85.6%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 3.95e-01 100.0% 71.0%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 47.0 4.41e-01 100.0% 69.9%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.53e-01 100.0% 88.7%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 49.0 3.65e-01 100.0% 37.2%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.59 48.0 3.85e-01 100.0% 94.7%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.58 50.0 4.18e-01 100.0% 87.5%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.58 42.0 3.61e-01 80.4% 73.7%
3lm2A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 40.0 3.36e-01 71.4% 88.7%
2vpjA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.58 45.0 2.91e-01 87.5% 28.7%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 47.0 3.61e-01 94.6% 69.9%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 47.0 3.50e-01 94.6% 44.4%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 41.0 3.12e-01 80.4% 78.0%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 47.0 3.81e-01 100.0% 46.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.69e-01 100.0% 88.1%
3ec6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 43.0 3.43e-01 100.0% 37.5%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.57 42.0 4.33e-01 100.0% 87.0%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 3.48e-01 100.0% 37.5%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 48.0 4.65e-01 100.0% 85.5%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.56 45.0 3.71e-01 100.0% 67.7%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 43.0 3.41e-01 100.0% 38.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 4.20e-01 100.0% 85.7%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 47.0 4.67e-01 100.0% 91.4%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 3.83e-01 100.0% 58.1%
1b9mB02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 34.0 3.23e-01 91.1% 47.2%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.28e-01 91.1% 45.8%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 40.0 3.87e-01 82.1% 86.6%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 39.0 3.10e-01 80.4% 80.0%
4bdxA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.54 41.0 3.69e-01 85.7% 62.7%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.68e-01 100.0% 84.3%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 41.0 3.20e-01 92.9% 64.8%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 42.0 3.26e-01 100.0% 36.4%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.52e-01 100.0% 58.1%
6gpkA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.53 37.0 3.04e-01 73.2% 64.2%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 44.0 3.57e-01 100.0% 47.4%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 3.96e-01 100.0% 81.0%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.52 38.0 3.84e-01 100.0% 81.4%
2m47A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 36.0 2.68e-01 75.0% 26.4%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 45.0 4.32e-01 100.0% 86.4%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.47e-01 100.0% 56.2%
1dpjA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 36.0 2.82e-01 78.6% 92.9%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 40.0 3.88e-01 89.3% 92.2%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.51 41.0 3.88e-01 100.0% 76.1%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.51 44.0 2.92e-01 100.0% 59.2%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 3.54e-01 98.2% 68.2%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 42.0 4.24e-01 100.0% 93.1%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.72e-01 100.0% 91.7%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.50 40.0 3.83e-01 100.0% 76.1%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3989353 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.75 64.0 5.00e-01 98.2% 99.2%
3787756 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.73 55.0 3.95e-01 80.4% 82.3%
3663761 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 3.99e-01 100.0% 40.0%
3256498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.01e-01 100.0% 78.2%
167706 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.69 52.0 4.01e-01 82.1% 83.5%
3910727 4.1.1.353 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 0.69 55.0 5.29e-01 100.0% 76.9%
4954690 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 58.0 3.97e-01 100.0% 58.9%
3429682 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 4.38e-01 100.0% 56.0%
3669492 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 48.0 3.58e-01 100.0% 30.0%
3276452 220.4.1.6 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › Peptidase_M8 0.68 58.0 3.39e-01 100.0% 11.1%
3931993 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 4.75e-01 100.0% 71.7%
3416044 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 48.0 3.93e-01 100.0% 41.9%
3615659 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.66 55.0 3.88e-01 98.2% 83.7%
3475965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 4.99e-01 100.0% 93.3%
3465976 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 4.41e-01 100.0% 64.6%
5002755 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.65 46.0 4.94e-01 100.0% 93.3%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.65 46.0 4.42e-01 100.0% 66.2%
3935130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.75e-01 100.0% 80.0%
3511551 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 50.0 4.97e-01 100.0% 81.7%
4932814 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 40.0 4.66e-01 80.4% 100.0%
3941320 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.63 47.0 4.35e-01 100.0% 61.3%
3248299 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.63 53.0 3.11e-01 100.0% 10.9%
4963287 375.1.1.334 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_0758 0.63 40.0 4.05e-01 73.2% 65.5%
4203746 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.63 56.0 3.87e-01 100.0% 82.5%
3609378 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 55.0 4.62e-01 100.0% 73.7%
None — 0.62 42.0 2.64e-01 78.6% 12.8%
3469279 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.36e-01 100.0% 64.0%
3593635 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 55.0 4.41e-01 100.0% 69.1%
3515688 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 55.0 4.31e-01 100.0% 77.5%
3516854 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 53.0 4.26e-01 100.0% 68.7%
3356591 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.02e-01 100.0% 50.5%
3389062 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.33e-01 100.0% 74.3%
3609031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.05e-01 100.0% 50.0%
3547089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 45.0 3.95e-01 100.0% 51.1%
3936926 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.42e-01 100.0% 73.8%
3828348 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.25e-01 100.0% 67.7%
3395948 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.61 43.0 4.41e-01 100.0% 80.0%
4106356 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.60 51.0 4.02e-01 100.0% 90.0%
3515495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 44.0 3.75e-01 100.0% 47.4%
3491895 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.60 52.0 4.34e-01 100.0% 66.0%
3900957 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 3.92e-01 100.0% 66.2%
3473704 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 49.0 4.40e-01 100.0% 80.0%
2033715 3804.1.1.1 ↗ alpha bundles › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › Cas13a_endoribonuclease 0.59 48.0 3.14e-01 100.0% 19.7%
3231263 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.59 43.0 4.48e-01 100.0% 90.0%
3547102 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 44.0 3.87e-01 100.0% 54.1%
3415886 220.1.1.146 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N 0.59 48.0 4.32e-01 100.0% 80.0%
3558926 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 43.0 3.72e-01 100.0% 50.0%
3328891 4.1.1.296 ↗ beta barrels › SH3 › SH3 › SH3 › TDBD 0.58 51.0 4.93e-01 100.0% 90.8%
3535268 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 43.0 3.72e-01 100.0% 48.4%
3816553 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.58 41.0 4.21e-01 100.0% 78.2%
4437258 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.58 49.0 4.00e-01 100.0% 65.2%
3998029 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 50.0 4.14e-01 100.0% 66.7%
4972400 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 41.0 4.41e-01 80.4% 97.8%
3619813 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 42.0 3.44e-01 100.0% 39.1%
3480822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 43.0 4.46e-01 100.0% 96.0%
3057477 220.1.1.146 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N 0.58 47.0 4.20e-01 100.0% 75.8%
3612184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.12e-01 100.0% 73.3%
3508441 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 43.0 3.80e-01 100.0% 51.6%
3596676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 43.0 3.73e-01 100.0% 51.1%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 42.0 3.94e-01 100.0% 61.3%
3315100 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.02e-01 100.0% 69.2%
3926363 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 47.0 3.91e-01 100.0% 61.7%
3883165 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 43.0 3.66e-01 100.0% 48.0%
4028811 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.57 46.0 3.86e-01 100.0% 75.7%
3313119 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 41.0 3.78e-01 100.0% 56.2%
3890922 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.57 49.0 4.07e-01 100.0% 66.7%
3359784 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 40.0 3.91e-01 100.0% 67.7%
3768095 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 42.0 3.62e-01 100.0% 48.4%
3547093 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 42.0 3.75e-01 100.0% 53.3%
3877938 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 42.0 3.73e-01 100.0% 53.3%
3879068 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 42.0 3.73e-01 100.0% 54.1%
3627615 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.56 48.0 3.66e-01 100.0% 49.0%
5065441 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 40.0 4.06e-01 78.6% 81.1%
4883194 601.52.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain 0.56 49.0 3.17e-01 100.0% 57.9%
153172 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 43.0 3.74e-01 100.0% 53.3%
3877478 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 41.0 3.51e-01 100.0% 46.0%
3920536 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 3.53e-01 100.0% 46.9%
3248039 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 45.0 3.88e-01 98.2% 69.0%
3858885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.41e-01 100.0% 96.4%
3571064 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 40.0 3.61e-01 100.0% 55.3%
3646521 4.2.1.4 ↗ beta barrels › SH3 › SAND › SAND › TDBD 0.54 45.0 4.19e-01 100.0% 84.0%
3833006 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 42.0 2.69e-01 87.5% 23.2%
3881121 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 39.0 3.38e-01 100.0% 46.0%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 44.0 3.47e-01 100.0% 40.7%
4940485 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 46.0 3.59e-01 100.0% 80.0%
3501699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.59e-01 100.0% 58.7%
3407820 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.53 39.0 3.46e-01 100.0% 54.1%
3496659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.86e-01 100.0% 78.3%
3708813 5.1.4.167 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st 0.53 46.0 2.79e-01 100.0% 20.5%
3185844 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 43.0 4.02e-01 94.6% 81.4%
4946882 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 35.0 3.54e-01 76.8% 76.4%
D2 high residues 66-180
PDB
Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06208.18 best BDV_G 161.2 4.80e-47 100.0% 23.8%
D3 high residues 349-433
PDB
D4 medium residues 23-50_268-348
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06208.18 best BDV_G 112.9 2.10e-32 76.1% 17.3%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.53 30.0 3.46e-01 99.1% 78.9%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.52 29.0 3.28e-01 100.0% 71.4%
4edpA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 28.0 2.53e-01 89.0% 35.0%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 33.0 2.94e-01 89.9% 45.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2488247 4300.1.1.1 ↗ beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Glycoprotein_B 0.73 66.0 5.53e-01 100.0% 70.6%
3931130 4300.1.1.0 ↗ beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like 0.68 59.0 5.31e-01 95.4% 78.0%
3929658 4300.1.1.0 ↗ beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like 0.67 59.0 4.38e-01 96.3% 97.1%
3579467 304.151.1.4 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF25899 0.50 37.0 3.53e-01 80.7% 66.4%