glycoprotein

Euk-Vir

Wuhan_House_Fly_Virus_1

glycoprotein__YP_009304979__Wuhan_House_Fly_Virus_1__1608104

Identity

70.1 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Sigmavirus› Wuhan_House_Fly_Virus_1

TaxID: 1608104

View cluster (9 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-52_290-414

PDB

Domain cluster: rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24833.2 best	Rhabdo_glycop_CD	66.8	2.80e-18	69.6%	99.2%

D2 high residues 197-276

PDB

Domain cluster: rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294

D3 medium residues 62-196_442-479

PDB

Domain cluster: rep: glycoprotein__YP_001285391__European_bat_1_lyssavirus__57482__D64-223_238-266

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00974.25 best	Rhabdo_glycop_FD	94.6	7.20e-27	57.8%	98.0%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1se8A02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.55	24.0	2.99e-01	75.1%	62.2%
1vwxS02	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.53	22.0	3.04e-01	74.6%	78.9%
2qsdA01	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.51	20.0	2.99e-01	72.3%	86.6%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1503409	220.3.1.1 ↗	beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop	0.85	64.0	7.27e-01	76.3%	100.0%
2530507	220.3.1.3 ↗	beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1	0.68	51.0	4.67e-01	78.0%	96.9%
2124211	220.3.1.2 ↗	beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64	0.63	46.0	4.74e-01	74.6%	100.0%
2464208	220.3.1.2 ↗	beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64	0.62	45.0	4.68e-01	74.0%	100.0%
3892842	3115.1.1.0 ↗	a+b two layers › GP2-like › RplX-like › RplX-like	0.57	23.0	3.58e-01	75.1%	98.5%
3517068	3115.1.1.6 ↗	a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494	0.56	22.0	3.37e-01	71.1%	90.8%
3942540	5084.8.1.1 ↗	beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher	0.50	26.0	1.92e-01	86.1%	18.5%