glycoprotein

Euk-Vir

Gannoruwa_bat_lyssavirus

glycoprotein__YP_009325517__Gannoruwa_bat_lyssavirus__1846259

Identity

75.9 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Lyssavirus› Gannoruwa_bat_lyssavirus

TaxID: 1846259

View cluster (70 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 71-205

PDB

Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00974.25 best	Rhabdo_glycop_FD	82.7	3.80e-23	77.0%	100.0%

D2 medium residues 39-70_206-302

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24834.2 best	PH_Rhabdo_glycop	97.4	5.50e-28	55.0%	73.3%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2qlzA02	6.10.250.2960	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.61	21.0	2.59e-01	99.2%	44.2%
1kz7C02	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.57	39.0	3.89e-01	70.5%	87.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3403826	220.1.1.151 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MRCK	0.59	42.0	3.73e-01	72.1%	93.0%
3594682	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.55	39.0	3.01e-01	72.1%	80.3%
3609894	219.1.1.13 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core	0.52	37.0	3.37e-01	72.1%	86.1%

D3 medium residues 303-416

PDB

Domain cluster: rep: glycoprotein__YP_010086563__Kwatta_virus__1272945__D21-47_334-461

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24833.2 best	Rhabdo_glycop_CD	82.3	4.50e-23	75.4%	72.7%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3363778	390.1.1.0 ↗	few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like	0.53	28.0	3.57e-01	77.2%	100.0%
5075402	210.1.3.3 ↗	a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4	0.51	40.0	3.08e-01	86.0%	81.8%